FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
 vn
Name
 vein
Annotation Symbol
 CG10491
FlyBase ID
FBgn0003984
Paralogues
 Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head2.2 ± 0.31.11.7 ± 0.6N.A.1.10n.s.  
Eye5.4 ± 1.32.73.7 ± 0.11.91.45n.s.  
Brain / CNS0.5 ± 0.0N.A.0.4 ± 0.0N.A.1.00p < 0.051.0 ± 0.1N.A.
Thoracicoabdominal ganglion1.5 ± 0.2N.A.1.6 ± 0.1N.A.1.00n.s.  
Crop3.5 ± 0.21.82.9 ± 1.01.41.23n.s.  
Midgut0.8 ± 0.0N.A.0.4 ± 0.2N.A.1.00n.s.0.3 ± 0.1N.A.
Hindgut0.7 ± 0.1N.A.0.4 ± 0.1N.A.1.00p < 0.050.5 ± 0.1N.A.
Malpighian Tubules2.9 ± 1.01.42.7 ± 1.91.41.06n.s.0.9 ± 0.2N.A.
Rectal pad1.2 ± 0.1N.A.1.2 ± 0.1N.A.1.00n.s.  
Salivary gland0.4 ± 0.2N.A.0.2 ± 0.1N.A.1.00n.s.0.3 ± 0.1N.A.
Fat body0.4 ± 0.3N.A.0.3 ± 0.1N.A.1.00n.s.0.1 ± 0.1N.A.
Heart2.0 ± 0.41.02.3 ± 1.31.10.90n.s.  
Trachea      1.8 ± 0.2N.A.
Ovary  0.1 ± 0.0N.A.    
Virgin Spermatheca  0.6 ± 0.1N.A.    
Mated Spermatheca  0.7 ± 0.2N.A.    
Testis0.8 ± 0.2N.A.      
Accessory glands0.2 ± 0.0N.A.      
Carcass0.9 ± 0.2N.A.0.6 ± 0.1N.A.1.00n.s.1.2 ± 0.2N.A.
Garland cells      5.2 ± 2.42.6
Whole body1.9 ± 0.30.6 ± 0.01.00p < 0.050.4 ± 0.1
download
Rotate to see Transcript Table
View in UCSC Genome Browser
Transcript FPKMs 
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0077082
RCFBtr0300010
download
*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.