FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Trf4-1
Name
Topoisomerase related function 4-1
Annotation Symbol
CG11265
FlyBase ID
FBgn0030049
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head7.0 ± 0.51.55.8 ± 1.20.61.20n.s.  
Eye5.3 ± 0.31.25.1 ± 0.00.51.04n.s.  
Brain / CNS4.6 ± 0.31.04.4 ± 0.70.41.06n.s.5.1 ± 0.52.5
Thoracicoabdominal ganglion4.7 ± 0.31.05.3 ± 0.10.50.89n.s.  
Crop3.2 ± 0.60.73.8 ± 1.20.40.86n.s.  
Midgut4.8 ± 0.71.12.7 ± 0.50.31.80p < 0.052.5 ± 0.21.2
Hindgut3.9 ± 0.30.94.5 ± 0.30.40.87n.s.2.9 ± 0.71.4
Malpighian Tubules3.8 ± 0.90.84.3 ± 0.50.40.89n.s.2.2 ± 0.21.1
Rectal pad2.0 ± 0.10.52.5 ± 0.00.20.82n.s.  
Salivary gland3.9 ± 0.10.95.1 ± 1.40.50.77n.s.4.4 ± 0.52.1
Fat body6.4 ± 0.51.48.1 ± 1.60.80.79n.s.3.1 ± 0.11.5
Heart6.4 ± 0.41.48.8 ± 0.90.90.74p < 0.05  
Trachea      6.4 ± 0.73.1
Ovary  13 ± 0.41.3    
Virgin Spermatheca  8.4 ± 1.30.8    
Mated Spermatheca  8.9 ± 2.30.9    
Testis3.1 ± 0.20.7      
Accessory glands2.7 ± 0.30.6      
Carcass3.9 ± 0.50.94.6 ± 0.00.50.85n.s.3.0 ± 0.31.5
Garland cells      6.2 ± 0.33.0
Whole body4.5 ± 0.310 ± 1.60.45p < 0.052.0 ± 0.3
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RCFBtr0071212
REFBtr0071213
RFFBtr0112963
RGFBtr0112964
RHFBtr0331723
RIFBtr0331724
RJFBtr0331725
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.