FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)
Gene:
Symbol
Obp56a
Obp56a
Name
Odorant-binding protein 56a
Odorant-binding protein 56a
Annotation Symbol
CG11797
CG11797
| Adult Male | Adult Female | Male v. Female | Larval | |||||
|---|---|---|---|---|---|---|---|---|
| Tissue | FPKM | Enrichment | FPKM | Enrichment | M/F | p value | FPKM | Enrichment |
| Head | 13 ± 4.1 | 0.1 | 18 ± 10.0 | 0.5 | 0.73 | n.s. | ||
| Eye | 1.1 ± 0.2 | 0.0 | 0.9 ± 1.0 | 0.0 | 1.00 | n.s. | ||
| Brain / CNS | 0.2 ± 0.1 | 0.0 | 0.1 ± 0.1 | 0.0 | 1.00 | n.s. | 1.4 ± 1.7 | 0.1 |
| Thoracicoabdominal ganglion | 0.5 ± 0.2 | 0.0 | 0.8 ± 0.0 | 0.0 | 1.00 | n.s. | ||
| Crop | 2.6 ± 3.4 | 0.0 | 0.4 ± 0.5 | 0.0 | 1.30 | n.s. | ||
| Midgut | 0.2 ± 0.0 | 0.0 | 0.1 ± 0.2 | 0.0 | 1.00 | n.s. | 0.1 ± 0.1 | 0.0 |
| Hindgut | 1.4 ± 0.1 | 0.0 | 0.7 ± 0.6 | 0.0 | 1.00 | n.s. | 1.4 ± 1.4 | 0.1 |
| Malpighian Tubules | 0.6 ± 0.6 | 0.0 | 0.1 ± 0.1 | 0.0 | 1.00 | n.s. | 0.0 ± 0.1 | 0.0 |
| Rectal pad | 37 ± 4.1 | 0.2 | 215 ± 82 | 5.9 | 0.17 | n.s. | ||
| Salivary gland | 7.1 ± 0.3 | 0.0 | 1.9 ± 1.2 | 0.1 | 3.6 | n.s. | 0.3 ± 0.0 | 0.0 |
| Fat body | 2.6 ± 2.3 | 0.0 | 0.7 ± 1.0 | 0.0 | 1.30 | n.s. | 1.2 ± 1.1 | 0.0 |
| Heart | 26 ± 19 | 0.1 | 0.0 ± 0.0 | 0.0 | 13 | n.s. | ||
| Trachea | 717 ± 411 | 30 | ||||||
| Ovary | 0.1 ± 0.1 | 0.0 | ||||||
| Virgin Spermatheca | 2.9 ± 4.6 | 0.1 | ||||||
| Mated Spermatheca | 5.1 ± 6.8 | 0.1 | ||||||
| Testis | 4.6 ± 2.5 | 0.0 | ||||||
| Accessory glands | 0.1 ± 0.1 | 0.0 | ||||||
| Carcass | 102 ± 22 | 0.5 | 27 ± 19 | 0.7 | 3.8 | p < 0.05 | 81 ± 37 | 3.4 |
| Garland cells | 1.4 ± 1.6 | 0.1 | ||||||
| Whole body | 187 ± 32 | 37 ± 6.8 | 5.1 | p < 0.05 | 24 ± 5.7 | |||
Rotate to see Transcript Table
| Transcript | Male | Female | Larval | ||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Name | ID | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Rp | Sg | Fb | Ht | Ts | Ag | Cs | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Rp | Sg | Fb | Ht | Ov | Vs | Ms | Cs | Ns | Mg | Hg | Tu | Sg | Fb | Tr | Cs | Ga |
| RA | FBtr0086476 | ||||||||||||||||||||||||||||||||||||||||
*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.
See Docs for info on the chemistry used to sequence different tissues.