FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
Rab39
Name
Rab39
Annotation Symbol
CG12156
FlyBase ID
FBgn0029959
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head17 ± 0.61.417 ± 1.41.80.98n.s.  
Eye19 ± 0.01.519 ± 0.32.10.97n.s.  
Brain / CNS12 ± 0.91.014 ± 0.51.50.85p < 0.0510 ± 1.50.7
Thoracicoabdominal ganglion12 ± 3.81.015 ± 1.21.60.80n.s.  
Crop19 ± 2.31.618 ± 0.71.91.08n.s.  
Midgut16 ± 0.51.316 ± 2.01.81.01n.s.33 ± 3.22.4
Hindgut17 ± 1.41.418 ± 0.31.90.95n.s.16 ± 3.21.2
Malpighian Tubules30 ± 5.12.430 ± 3.73.30.98n.s.24 ± 3.31.8
Fat body20 ± 2.21.618 ± 2.71.91.11n.s.12 ± 1.10.9
Salivary gland16 ± 0.81.311 ± 0.31.21.49n.s.6.6 ± 0.60.5
Heartpendingpending  
Trachea      7.1 ± 0.60.5
Ovary  8.4 ± 1.10.9    
Virgin Spermatheca  11 ± 1.31.2    
Mated Spermatheca  15 ± 4.61.7    
Testis6.7 ± 0.50.5      
Accessory glands9.4 ± 1.30.8      
Carcass24 ± 4.01.922 ± 3.02.31.09n.s.9.9 ± 1.10.7
Rectal pad22 ± 1.11.819 ± 0.82.11.18n.s.  
Whole body12 ± 1.29.3 ± 0.91.32p < 0.0514 ± 1.0
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCs
RAFBtr0071072
RBFBtr0307272
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Tissue Comparability
Adult fat body and spermatheca were sequenced using a different chemistry from the other tissues (see Docs). The results for these tissues are comparable within this group, but not with other tissues. The identification of their individual transcripts is also less rigorous.