FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Cse1
Name
Chromosome segregation 1
Annotation Symbol
CG13281
FlyBase ID
FBgn0022213
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head6.2 ± 0.50.87.6 ± 0.30.20.81p < 0.05  
Eye7.9 ± 0.11.08.1 ± 0.20.20.98n.s.  
Brain / CNS5.8 ± 0.20.75.5 ± 0.10.21.06n.s.37 ± 3.02.7
Thoracicoabdominal ganglion6.8 ± 0.40.87.5 ± 0.00.20.90n.s.  
Crop12 ± 0.21.411 ± 1.80.31.08n.s.  
Midgut14 ± 0.51.78.8 ± 0.40.21.64p < 0.019.4 ± 0.70.7
Hindgut9.6 ± 1.01.29.5 ± 0.40.31.01n.s.9.5 ± 1.50.7
Malpighian Tubules8.9 ± 0.41.18.9 ± 0.80.21.00n.s.9.9 ± 1.50.7
Rectal pad5.7 ± 0.60.77.0 ± 0.00.20.81n.s.  
Salivary gland8.8 ± 0.91.118 ± 100.50.50n.s.22 ± 1.81.7
Fat body7.1 ± 1.20.98.0 ± 1.20.20.89n.s.16 ± 1.31.2
Heart11 ± 1.61.325 ± 180.70.45n.s.  
Trachea      25 ± 0.71.9
Ovary  52 ± 1.91.4    
Virgin Spermatheca  7.1 ± 1.00.2    
Mated Spermatheca  8.2 ± 1.60.2    
Testis18 ± 1.62.2      
Accessory glands8.2 ± 0.41.0      
Carcass7.8 ± 1.00.912 ± 3.60.30.66n.s.21 ± 1.11.6
Garland cells      12 ± 0.20.9
Whole body8.3 ± 1.136 ± 4.80.23p < 0.0113 ± 1.3
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0080930
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.