FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
Cip4
Name
Cdc42-interacting protein 4
Annotation Symbol
CG15015
FlyBase ID
FBgn0035533
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head12 ± 0.61.710 ± 3.11.51.16n.s.  
Eye8.4 ± 1.81.27.0 ± 0.11.01.19n.s.  
Brain / CNS14 ± 0.12.013 ± 1.01.91.07n.s.10 ± 1.81.6
Thoracicoabdominal ganglion8.6 ± 0.21.29.1 ± 1.31.30.95n.s.  
Crop11 ± 3.91.610 ± 3.91.51.08n.s.  
Midgut9.4 ± 0.71.38.6 ± 1.31.31.08n.s.12 ± 1.71.9
Hindgut6.9 ± 0.61.05.7 ± 0.30.81.22n.s.4.2 ± 1.00.7
Malpighian Tubules6.2 ± 1.90.97.4 ± 3.31.10.83n.s.2.7 ± 0.60.4
Fat body4.7 ± 0.40.76.1 ± 1.20.90.76n.s.2.5 ± 0.70.4
Salivary gland6.5 ± 0.20.94.8 ± 0.20.71.37n.s.10.0 ± 2.91.6
Heartpendingpending  
Trachea      8.6 ± 0.61.4
Ovary  7.2 ± 0.71.1    
Virgin Spermatheca  7.7 ± 0.51.1    
Mated Spermatheca  7.4 ± 0.71.1    
Testis6.6 ± 1.21.0      
Accessory glands7.2 ± 0.61.0      
Carcass4.8 ± 0.30.75.6 ± 0.60.80.86n.s.6.2 ± 0.21.0
Rectal pad9.3 ± 0.71.38.9 ± 0.21.31.04n.s.  
Whole body7.0 ± 0.56.8 ± 0.91.02n.s.6.2 ± 0.4
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCs
RAFBtr0073339
RBFBtr0113138
RCFBtr0306094
RDFBtr0306095
REFBtr0306096
RFFBtr0306533
RGFBtr0306534
RHFBtr0308201
RIFBtr0308202
RJFBtr0333570
RKFBtr0333571
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Tissue Comparability
Adult fat body and spermatheca were sequenced using a different chemistry from the other tissues (see Docs). The results for these tissues are comparable within this group, but not with other tissues. The identification of their individual transcripts is also less rigorous.