FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
rho-4
Name
rhomboid-4
Annotation Symbol
CG1697
FlyBase ID
FBgn0030318
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head5.3 ± 1.11.14.4 ± 0.70.61.20n.s.  
Eye6.3 ± 0.01.35.9 ± 0.20.81.07n.s.  
Brain / CNS3.4 ± 0.20.73.2 ± 0.10.41.05n.s.8.3 ± 0.50.6
Thoracicoabdominal ganglion3.3 ± 0.10.73.4 ± 0.20.50.98n.s.  
Crop16 ± 1.23.419 ± 3.82.50.86n.s.  
Midgut24 ± 4.75.028 ± 4.73.70.87n.s.34 ± 2.22.5
Hindgut13 ± 1.22.817 ± 0.62.30.77p < 0.0513 ± 3.50.9
Malpighian Tubules5.8 ± 1.71.27.1 ± 0.30.90.81n.s.7.9 ± 0.40.6
Rectal pad9.2 ± 0.51.912 ± 0.61.60.75n.s.  
Salivary gland8.4 ± 1.21.77.0 ± 0.10.91.20n.s.11 ± 1.30.8
Fat body2.9 ± 1.10.62.7 ± 1.10.41.07n.s.3.5 ± 0.80.3
Heart4.1 ± 1.30.94.7 ± 1.20.60.89n.s.  
Trachea      14 ± 0.31.0
Ovary  8.1 ± 0.21.1    
Virgin Spermatheca  9.0 ± 1.51.2    
Mated Spermatheca  8.2 ± 0.61.1    
Testis6.2 ± 0.81.3      
Accessory glands6.8 ± 1.11.4      
Carcass4.7 ± 0.21.04.3 ± 0.60.61.10n.s.8.1 ± 1.80.6
Garland cells      8.4 ± 2.40.6
Whole body4.8 ± 0.37.5 ± 0.30.64p < 0.0114 ± 0.5
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0073519
RBFBtr0073518
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.