FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Gene:
Symbol
Sfmbt
Sfmbt
Name
Scm-related gene containing four mbt domains
Scm-related gene containing four mbt domains
Annotation Symbol
CG16975
CG16975
| Adult Male | Adult Female | Male v. Female | Larval | |||||
|---|---|---|---|---|---|---|---|---|
| Tissue | FPKM | Enrichment | FPKM | Enrichment | M/F | p value | FPKM | Enrichment |
| Head | 5.4 ± 0.4 | 1.4 | 5.3 ± 0.6 | 0.4 | 1.03 | n.s. | ||
| Eye | 6.7 ± 0.6 | 1.7 | 5.8 ± 0.2 | 0.5 | 1.15 | n.s. | ||
| Brain / CNS | 9.2 ± 0.1 | 2.3 | 7.9 ± 0.9 | 0.6 | 1.16 | n.s. | 15 ± 0.6 | 3.5 |
| Thoracicoabdominal ganglion | 6.3 ± 0.6 | 1.6 | 6.9 ± 0.5 | 0.5 | 0.92 | n.s. | ||
| Crop | 5.6 ± 0.2 | 1.4 | 4.4 ± 0.8 | 0.3 | 1.26 | n.s. | ||
| Midgut | 4.8 ± 0.6 | 1.2 | 3.1 ± 0.1 | 0.2 | 1.52 | p < 0.05 | 4.1 ± 0.4 | 1.0 |
| Hindgut | 4.5 ± 0.2 | 1.1 | 4.7 ± 0.1 | 0.4 | 0.95 | n.s. | 4.0 ± 0.7 | 0.9 |
| Malpighian Tubules | 3.9 ± 0.5 | 1.0 | 4.0 ± 0.6 | 0.3 | 0.98 | n.s. | 3.1 ± 0.0 | 0.7 |
| Fat body | 2.7 ± 0.3 | 0.7 | 3.3 ± 0.2 | 0.3 | 0.81 | n.s. | 5.0 ± 0.1 | 1.2 |
| Salivary gland | 5.7 ± 0.2 | 1.4 | 7.2 ± 2.6 | 0.6 | 0.80 | n.s. | 7.0 ± 0.2 | 1.7 |
| Heart | pending | — | pending | — | ||||
| Trachea | 6.9 ± 0.3 | 1.6 | ||||||
| Ovary | 17 ± 1.5 | 1.4 | ||||||
| Virgin Spermatheca | 3.0 ± 0.4 | 0.2 | ||||||
| Mated Spermatheca | 4.1 ± 0.4 | 0.3 | ||||||
| Testis | 4.6 ± 0.4 | 1.1 | ||||||
| Accessory glands | 5.9 ± 0.2 | 1.5 | ||||||
| Carcass | 4.0 ± 0.5 | 1.0 | 5.3 ± 1.0 | 0.4 | 0.75 | n.s. | 6.3 ± 0.1 | 1.5 |
| Rectal pad | 3.6 ± 0.2 | 0.9 | 3.7 ± 0.2 | 0.3 | 0.98 | n.s. | ||
| Whole body | 4.0 ± 0.4 | 13 ± 2.6 | 0.32 | p < 0.05 | 4.2 ± 0.1 | |||
Rotate to see Transcript Table
| Transcript | Male | Female | Larval | |||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Name | ID | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Fb | Sg | Ht | Ts | Ag | Cs | Rp | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Fb | Sg | Ht | Ov | Vs | Ms | Cs | Rp | Ns | Mg | Hg | Tu | Fb | Sg | Tr | Cs |
| RA | FBtr0080491 | |||||||||||||||||||||||||||||||||||||||
| RB | FBtr0080492 | |||||||||||||||||||||||||||||||||||||||
| RC | FBtr0289981 | |||||||||||||||||||||||||||||||||||||||
| RD | FBtr0333236 | |||||||||||||||||||||||||||||||||||||||
*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.