FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Pepck1
Name
Phosphoenolpyruvate carboxykinase 1
Annotation Symbol
CG17725
FlyBase ID
FBgn0003067
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head350 ± 201.4240 ± 652.51.46n.s.  
Eye259 ± 751.1240 ± 6.32.51.08n.s.  
Brain / CNS8.6 ± 8.90.014 ± 6.60.10.61n.s.2.4 ± 0.90.0
Thoracicoabdominal ganglion72 ± 3.10.344 ± 190.51.65n.s.  
Crop50 ± 500.217 ± 1.20.22.9n.s.  
Midgut19 ± 4.80.156 ± 170.60.35n.s.395 ± 941.7
Hindgut24 ± 6.80.189 ± 360.90.26n.s.9.8 ± 3.10.0
Malpighian Tubules59 ± 240.276 ± 120.80.78n.s.204 ± 500.9
Rectal pad24 ± 0.30.123 ± 110.21.05n.s.  
Salivary gland125 ± 4.70.521 ± 0.20.25.9p < 0.0526 ± 4.20.1
Fat body800 ± 203.3728 ± 987.51.10n.s.268 ± 991.2
Heart1166 ± 3004.8807 ± 4298.31.44n.s.  
Trachea      22 ± 9.80.1
Ovary  5.0 ± 2.00.1    
Virgin Spermatheca  180 ± 251.8    
Mated Spermatheca  389 ± 314.0    
Testis24 ± 3.90.1      
Accessory glands15 ± 6.60.1      
Carcass614 ± 1812.5736 ± 1917.60.83n.s.171 ± 320.7
Garland cells      56 ± 320.2
Whole body244 ± 2997 ± 332.5p < 0.01230 ± 84
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0086701
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*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.
WARNING: Transcript Ambiguity for this Gene!
Because FlyBase assigns a unique transcript name and identifier for each unique protein, the rare cases in which such proteins result from alternative translation of the same mRNA give rise to situations in which there are two or more different identifiers for the same physical transcript. RNAseq analysis can only deal with unique sequences, and in such cases arbitrarily assigns the data from a sequence to one of the different transcript identifiers. The result is that some named transcripts will be missing, or data for some transcripts will actually include that for others. In the case of gene FBgn0003067 the situation is:

Data for FBtr0086701 include those for FBtr0344533 (gene FBgn0266488): Di- or poly-cistronic mRNA

*** More extensive information about transcript ambiguity and its implications can be found in the Docs ***