FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
Sema1a
Name
Semaphorin 1a
Annotation Symbol
CG18405
FlyBase ID
FBgn0011259
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head17 ± 2.24.311 ± 3.24.41.56n.s.  
Eye8.6 ± 5.22.17.2 ± 5.52.91.19n.s.  
Brain / CNS18 ± 0.64.616 ± 4.26.51.12n.s.15 ± 3.37.5
Thoracicoabdominal ganglion15 ± 2.83.815 ± 0.65.91.01n.s.  
Crop0.9 ± 0.10.21.2 ± 0.00.51.00n.s.  
Midgut0.7 ± 0.10.20.3 ± 0.00.11.00p < 0.010.5 ± 0.2N.A.
Hindgut0.3 ± 0.10.10.3 ± 0.00.11.00n.s.0.3 ± 0.1N.A.
Malpighian Tubules0.4 ± 0.00.10.5 ± 0.00.21.00n.s.0.3 ± 0.1N.A.
Fat bodypendingpending0.5 ± 0.2N.A.
Salivary gland0.6 ± 0.10.21.0 ± 0.60.41.00n.s.0.4 ± 0.1N.A.
Heartpendingpending  
Trachea      2.2 ± 0.31.1
Ovary  2.7 ± 0.21.1    
Virgin Spermatheca  1.1 ± 0.50.4    
Mated Spermatheca  1.5 ± 0.50.6    
Testis1.5 ± 0.40.4      
Accessory glands1.6 ± 0.30.4      
Carcass1.4 ± 0.50.41.1 ± 0.40.41.00n.s.1.6 ± 0.4N.A.
Rectal pad1.3 ± 0.20.31.3 ± 0.20.51.00n.s.  
Whole body4.0 ± 0.32.5 ± 0.01.60p < 0.050.7 ± 0.2
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCs
RAFBtr0079691
RDFBtr0303877
REFBtr0303878
RFFBtr0303879
RGFBtr0329930
RHFBtr0329931
RIFBtr0329932
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