FlyAtlas 2: The RNAseq-based atlas of Drosophila gene expression

Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
SmE

Name
Small ribonucleoprotein particle protein SmE

Annotation Symbol
CG18591

FlyBase ID
FBgn0261790

Paralogues
Paralogues(s)

SDs Whole Body Male v. Female

Gene FPKMs and Enrichments

	Adult Male		Adult Female		Male v. Female		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment	M/F	p value	FPKM	Enrichment
Head	28 ± 3.1	1.2	24 ± 11	0.3	1.16	n.s.
Eye	12 ± 0.8	0.5	13 ± 0.2	0.2	0.90	n.s.
Brain / CNS	14 ± 0.7	0.6	14 ± 1.0	0.2	0.98	n.s.	57 ± 3.8	2.1
Thoracicoabdominal ganglion	15 ± 3.4	0.6	13 ± 0.9	0.1	1.22	n.s.
Crop	12 ± 2.2	0.5	16 ± 0.4	0.2	0.73	n.s.
Midgut	13 ± 1.1	0.5	18 ± 2.2	0.2	0.72	p < 0.05	15 ± 1.8	0.6
Hindgut	19 ± 0.8	0.8	17 ± 0.5	0.2	1.10	p < 0.05	17 ± 3.8	0.6
Malpighian Tubules	18 ± 9.2	0.7	23 ± 8.6	0.3	0.77	n.s.	17 ± 1.7	0.7
Rectal pad	20 ± 1.8	0.8	17 ± 1.3	0.2	1.16	n.s.
Salivary gland	12 ± 0.6	0.5	17 ± 3.0	0.2	0.73	n.s.	42 ± 2.5	1.6
Fat body	19 ± 0.5	0.8	20 ± 1.5	0.2	0.96	n.s.	29 ± 1.7	1.1
Heart	13 ± 3.7	0.5	9.4 ± 4.2	0.1	1.41	n.s.
Trachea							30 ± 1.5	1.1
Ovary			97 ± 7.7	1.2
Virgin Spermatheca			12 ± 1.6	0.1
Mated Spermatheca			13 ± 1.3	0.2
Testis	48 ± 17	2.0
Accessory glands	48 ± 1.5	2.0
Carcass	16 ± 2.2	0.7	20 ± 2.4	0.2	0.83	n.s.	28 ± 1.1	1.0
Garland cells							18 ± 3.6	0.7

Whole body	24 ± 4.2		84 ± 6.0		0.29	p < 0.01	26 ± 4.9

Rotate to see Transcript Table

View in UCSC Genome Browser

Transcript FPKMs

Transcript		Male															Female																Larval
Name	ID	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ts	Ag	Cs	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ov	Vs	Ms	Cs	Ns	Mg	Hg	Tu	Sg	Fb	Tr	Cs	Ga
RA	FBtr0079560

*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.