FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
 Ama
Name
 Amalgam
Annotation Symbol
 CG2198
FlyBase ID
FBgn0000071
Paralogues
 Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head0.2 ± 0.1N.A.0.3 ± 0.2N.A.1.00n.s.  
Eye0.0 ± 0.0N.A.0.1 ± 0.0N.A.1.00n.s.  
Brain / CNS0.4 ± 0.1N.A.0.6 ± 0.2N.A.1.00n.s.42 ± 9.21.1
Thoracicoabdominal ganglion1.4 ± 0.5N.A.1.0 ± 0.2N.A.1.00n.s.  
Crop0.1 ± 0.1N.A.0.6 ± 0.1N.A.1.00n.s.  
Midgut0.1 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.18 ± 3.80.5
Hindgut0.1 ± 0.1N.A.0.1 ± 0.1N.A.1.00n.s.2.1 ± 0.50.1
Malpighian Tubules0.0 ± 0.1N.A.0.0 ± 0.1N.A.1.00n.s.1.9 ± 1.50.1
Rectal pad0.0 ± 0.0N.A.0.4 ± 0.2N.A.1.00n.s.  
Salivary gland0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.2.6 ± 2.80.1
Fat body0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.35 ± 511.0
Heart0.0 ± 0.1N.A.0.1 ± 0.1N.A.1.00p < 0.05  
Trachea      7.0 ± 4.60.2
Ovary  0.0 ± 0.0N.A.    
Virgin Spermatheca  0.0 ± 0.0N.A.    
Mated Spermatheca  0.4 ± 0.6N.A.    
Testis0.2 ± 0.1N.A.      
Accessory glands0.0 ± 0.0N.A.      
Carcass0.2 ± 0.1N.A.0.5 ± 0.5N.A.1.00n.s.6.0 ± 0.90.2
Garland cells      16 ± 4.70.4
Whole body0.0 ± 0.01.4 ± 0.41.00p < 0.0536 ± 20
download
Rotate to see Transcript Table
View in UCSC Genome Browser
Transcript FPKMs 
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0081619
RBFBtr0081618
RCFBtr0081620
download
*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.