FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
 ptc
Name
 patched
Annotation Symbol
 CG2411
FlyBase ID
FBgn0003892
Paralogues
 Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head0.8 ± 0.1N.A.0.8 ± 0.1N.A.1.00n.s.  
Eye1.4 ± 0.4N.A.1.1 ± 0.2N.A.1.00n.s.  
Brain / CNS0.2 ± 0.0N.A.0.2 ± 0.0N.A.1.00n.s.3.2 ± 0.51.6
Thoracicoabdominal ganglion0.4 ± 0.1N.A.0.3 ± 0.0N.A.1.00n.s.  
Crop2.6 ± 0.11.31.8 ± 0.9N.A.1.31n.s.  
Midgut7.6 ± 0.93.81.8 ± 0.3N.A.3.8p < 0.010.4 ± 0.2N.A.
Hindgut3.1 ± 0.21.51.8 ± 0.3N.A.1.54p < 0.010.8 ± 0.3N.A.
Malpighian Tubules2.2 ± 0.21.12.0 ± 0.41.01.09n.s.0.7 ± 0.3N.A.
Rectal pad1.9 ± 0.1N.A.1.4 ± 0.2N.A.1.00n.s.  
Salivary gland0.8 ± 0.1N.A.0.3 ± 0.0N.A.1.00n.s.1.7 ± 0.2N.A.
Fat body1.5 ± 0.2N.A.1.2 ± 0.3N.A.1.00n.s.1.0 ± 0.3N.A.
Heart1.5 ± 0.3N.A.1.7 ± 0.8N.A.1.00n.s.  
Trachea      6.0 ± 2.53.0
Ovary  0.2 ± 0.0N.A.    
Virgin Spermatheca  4.2 ± 1.62.1    
Mated Spermatheca  4.3 ± 0.82.1    
Testis2.9 ± 0.91.5      
Accessory glands1.4 ± 0.3N.A.      
Carcass0.9 ± 0.1N.A.0.7 ± 0.1N.A.1.00n.s.2.5 ± 0.71.3
Garland cells      3.5 ± 1.51.8
Whole body1.7 ± 0.20.7 ± 0.11.00p < 0.011.0 ± 0.2
download
Rotate to see Transcript Table
View in UCSC Genome Browser
Transcript FPKMs 
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0089427
download
*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.