FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)
Gene:
Symbol
Vti1a
Vti1a
Name
Vesicle transport through interaction with t-SNAREs 1a
Vesicle transport through interaction with t-SNAREs 1a
Annotation Symbol
CG3279
CG3279
| Adult Male | Adult Female | Male v. Female | Larval | |||||
|---|---|---|---|---|---|---|---|---|
| Tissue | FPKM | Enrichment | FPKM | Enrichment | M/F | p value | FPKM | Enrichment |
| Head | 9.4 ± 0.3 | 1.7 | 11 ± 1.9 | 1.1 | 0.87 | n.s. | ||
| Eye | 11 ± 0.2 | 1.9 | 11 ± 0.5 | 1.1 | 0.99 | n.s. | ||
| Brain / CNS | 16 ± 1.4 | 2.8 | 15 ± 0.9 | 1.6 | 1.06 | n.s. | 5.6 ± 0.3 | 1.0 |
| Thoracicoabdominal ganglion | 15 ± 0.7 | 2.7 | 15 ± 0.2 | 1.5 | 1.02 | n.s. | ||
| Crop | 8.0 ± 0.2 | 1.4 | 8.9 ± 0.2 | 0.9 | 0.90 | n.s. | ||
| Midgut | 6.3 ± 0.8 | 1.1 | 6.4 ± 0.6 | 0.7 | 1.00 | n.s. | 9.3 ± 0.3 | 1.6 |
| Hindgut | 6.7 ± 0.8 | 1.2 | 7.0 ± 0.1 | 0.7 | 0.96 | n.s. | 5.4 ± 1.8 | 0.9 |
| Malpighian Tubules | 6.8 ± 0.4 | 1.2 | 8.1 ± 0.9 | 0.8 | 0.84 | n.s. | 8.5 ± 1.2 | 1.5 |
| Rectal pad | 8.8 ± 0.3 | 1.5 | 7.7 ± 0.7 | 0.8 | 1.15 | n.s. | ||
| Salivary gland | 9.2 ± 0.2 | 1.6 | 8.3 ± 1.6 | 0.9 | 1.11 | n.s. | 8.5 ± 1.1 | 1.5 |
| Fat body | 4.0 ± 0.8 | 0.7 | 3.2 ± 1.9 | 0.3 | 1.24 | n.s. | 5.8 ± 1.3 | 1.0 |
| Heart | 5.9 ± 0.9 | 1.0 | 5.5 ± 0.7 | 0.6 | 1.07 | n.s. | ||
| Trachea | 4.3 ± 0.4 | 0.8 | ||||||
| Ovary | 12 ± 0.5 | 1.2 | ||||||
| Virgin Spermatheca | 2.8 ± 0.6 | 0.3 | ||||||
| Mated Spermatheca | 3.4 ± 1.1 | 0.4 | ||||||
| Testis | 7.9 ± 1.1 | 1.4 | ||||||
| Accessory glands | 6.7 ± 0.8 | 1.2 | ||||||
| Carcass | 6.9 ± 1.0 | 1.2 | 6.9 ± 0.5 | 0.7 | 1.00 | n.s. | 4.2 ± 0.4 | 0.7 |
| Garland cells | 4.5 ± 0.7 | 0.8 | ||||||
| Whole body | 5.7 ± 0.5 | 9.7 ± 0.8 | 0.58 | p < 0.01 | 5.7 ± 0.4 | |||
Rotate to see Transcript Table
| Transcript | Male | Female | Larval | ||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Name | ID | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Rp | Sg | Fb | Ht | Ts | Ag | Cs | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Rp | Sg | Fb | Ht | Ov | Vs | Ms | Cs | Ns | Mg | Hg | Tu | Sg | Fb | Tr | Cs | Ga |
| RA | FBtr0072607 | ||||||||||||||||||||||||||||||||||||||||
*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.
See Docs for info on the chemistry used to sequence different tissues.