FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
sc
Name
scute
Annotation Symbol
CG3827
FlyBase ID
FBgn0004170
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.  
Eye0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.  
Brain / CNS0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.1.7 ± 0.4N.A.
Thoracicoabdominal ganglion0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.  
Crop0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.  
Midgut0.1 ± 0.2N.A.0.4 ± 0.2N.A.1.00n.s.0.2 ± 0.0N.A.
Hindgut0.1 ± 0.0N.A.0.1 ± 0.0N.A.1.00n.s.0.2 ± 0.2N.A.
Malpighian Tubules0.0 ± 0.1N.A.0.0 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Rectal pad0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.  
Salivary gland0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.0.2 ± 0.1N.A.
Fat body0.2 ± 0.3N.A.0.1 ± 0.1N.A.1.00n.s.0.0 ± 0.1N.A.
HeartN.A.N.A.0.1 ± 0.2N.A.N.A.N.A.  
Trachea      0.6 ± 0.3N.A.
Ovary  0.5 ± 0.3N.A.    
Virgin Spermatheca  0.1 ± 0.2N.A.    
Mated Spermatheca  0.0 ± 0.0N.A.    
Testis0.1 ± 0.1N.A.      
Accessory glands0.0 ± 0.0N.A.      
Carcass0.0 ± 0.1N.A.0.1 ± 0.1N.A.1.00n.s.1.3 ± 0.4N.A.
Garland cells      0.3 ± 0.6N.A.
Whole body0.1 ± 0.10.3 ± 0.11.00p < 0.011.4 ± 0.9
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0070073
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.