FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)
Gene:
Symbol
ArfGAP1
ArfGAP1
Name
ADP-ribosylation factor GTPase activating protein 1
ADP-ribosylation factor GTPase activating protein 1
Annotation Symbol
CG4237
CG4237
| Adult Male | Adult Female | Male v. Female | Larval | |||||
|---|---|---|---|---|---|---|---|---|
| Tissue | FPKM | Enrichment | FPKM | Enrichment | M/F | p value | FPKM | Enrichment |
| Head | 9.0 ± 0.1 | 1.0 | 12 ± 1.7 | 0.9 | 0.75 | n.s. | ||
| Eye | 13 ± 0.3 | 1.5 | 14 ± 0.5 | 1.1 | 0.93 | n.s. | ||
| Brain / CNS | 9.9 ± 0.4 | 1.1 | 9.0 ± 0.2 | 0.7 | 1.10 | p < 0.05 | 7.6 ± 0.2 | 0.7 |
| Thoracicoabdominal ganglion | 12 ± 2.0 | 1.4 | 12 ± 1.0 | 1.0 | 0.95 | n.s. | ||
| Crop | 11 ± 0.9 | 1.3 | 11 ± 3.1 | 0.9 | 0.97 | n.s. | ||
| Midgut | 13 ± 0.7 | 1.5 | 12 ± 1.0 | 1.0 | 1.01 | n.s. | 19 ± 3.6 | 1.6 |
| Hindgut | 10 ± 0.8 | 1.2 | 9.8 ± 0.4 | 0.8 | 1.03 | n.s. | 10 ± 2.6 | 0.9 |
| Malpighian Tubules | 13 ± 3.2 | 1.5 | 15 ± 1.3 | 1.2 | 0.84 | n.s. | 14 ± 1.4 | 1.2 |
| Rectal pad | 9.9 ± 0.6 | 1.1 | 8.6 ± 0.3 | 0.7 | 1.16 | n.s. | ||
| Salivary gland | 28 ± 2.0 | 3.2 | 31 ± 0.2 | 2.4 | 0.88 | n.s. | 37 ± 6.0 | 3.2 |
| Fat body | 5.2 ± 1.0 | 0.6 | 7.2 ± 2.2 | 0.6 | 0.72 | n.s. | 35 ± 1.6 | 3.0 |
| Heart | 10 ± 1.1 | 1.2 | 14 ± 2.4 | 1.1 | 0.75 | n.s. | ||
| Trachea | 7.8 ± 1.4 | 0.7 | ||||||
| Ovary | 13 ± 1.5 | 1.0 | ||||||
| Virgin Spermatheca | 11 ± 1.0 | 0.9 | ||||||
| Mated Spermatheca | 12 ± 2.8 | 0.9 | ||||||
| Testis | 9.9 ± 1.4 | 1.1 | ||||||
| Accessory glands | 44 ± 18 | 5.1 | ||||||
| Carcass | 8.2 ± 1.4 | 1.0 | 11 ± 2.0 | 0.8 | 0.77 | n.s. | 7.9 ± 0.6 | 0.7 |
| Garland cells | 8.7 ± 2.3 | 0.8 | ||||||
| Whole body | 8.7 ± 1.1 | 13 ± 1.4 | 0.67 | p < 0.05 | 12 ± 1.2 | |||
Rotate to see Transcript Table
| Transcript | Male | Female | Larval | ||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Name | ID | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Rp | Sg | Fb | Ht | Ts | Ag | Cs | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Rp | Sg | Fb | Ht | Ov | Vs | Ms | Cs | Ns | Mg | Hg | Tu | Sg | Fb | Tr | Cs | Ga |
| RA | FBtr0075981 | ||||||||||||||||||||||||||||||||||||||||
| RB | FBtr0332088 | ||||||||||||||||||||||||||||||||||||||||
*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.
See Docs for info on the chemistry used to sequence different tissues.