FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
fne
Name
found in neurons
Annotation Symbol
CG4396
FlyBase ID
FBgn0086675
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head25 ± 2.74.815 ± 2.67.61.67p < 0.01  
Eye4.5 ± 0.00.93.2 ± 0.21.61.43n.s.  
Brain / CNS42 ± 2.97.936 ± 10.0181.17n.s.41 ± 8.721
Thoracicoabdominal ganglion31 ± 5.75.932 ± 1.1160.97n.s.  
Crop0.4 ± 0.20.10.6 ± 0.5N.A.1.00n.s.  
Midgut0.0 ± 0.00.00.0 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Hindgut0.0 ± 0.00.00.1 ± 0.1N.A.1.00n.s.0.0 ± 0.0N.A.
Malpighian Tubules0.0 ± 0.00.00.0 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Rectal pad0.1 ± 0.00.00.2 ± 0.0N.A.1.00n.s.  
Salivary gland0.6 ± 0.10.10.3 ± 0.0N.A.1.00n.s.0.1 ± 0.1N.A.
Fat body0.2 ± 0.10.00.2 ± 0.4N.A.1.00n.s.0.1 ± 0.1N.A.
Heart0.1 ± 0.10.00.1 ± 0.1N.A.1.00n.s.  
Trachea      0.1 ± 0.1N.A.
Ovary  0.0 ± 0.0N.A.    
Virgin Spermatheca  0.1 ± 0.1N.A.    
Mated Spermatheca  0.9 ± 1.0N.A.    
Testis0.1 ± 0.00.0      
Accessory glands0.0 ± 0.00.0      
Carcass2.1 ± 1.10.41.4 ± 0.9N.A.1.04n.s.1.8 ± 0.5N.A.
Garland cells      1.0 ± 0.3N.A.
Whole body5.3 ± 0.51.4 ± 0.22.6p < 0.011.5 ± 0.1
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0073712
RBFBtr0113493
RCFBtr0306738
RDFBtr0306739
REFBtr0308694
RGFBtr0333319
RHFBtr0333320
RIFBtr0343650
RJFBtr0343651
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.