FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)
Gene:
Symbol
Arpc3A
Arpc3A
Name
Actin-related protein 2/3 complex, subunit 3A
Actin-related protein 2/3 complex, subunit 3A
Annotation Symbol
CG4560
CG4560
| Adult Male | Adult Female | Male v. Female | Larval | |||||
|---|---|---|---|---|---|---|---|---|
| Tissue | FPKM | Enrichment | FPKM | Enrichment | M/F | p value | FPKM | Enrichment |
| Head | 11 ± 0.9 | 1.3 | 11 ± 0.6 | 0.7 | 1.01 | n.s. | ||
| Eye | 9.9 ± 0.3 | 1.1 | 9.1 ± 0.3 | 0.6 | 1.09 | n.s. | ||
| Brain / CNS | 14 ± 1.8 | 1.6 | 14 ± 0.1 | 0.9 | 1.03 | n.s. | 18 ± 0.7 | 1.0 |
| Thoracicoabdominal ganglion | 23 ± 1.5 | 2.7 | 22 ± 0.2 | 1.5 | 1.06 | n.s. | ||
| Crop | 12 ± 1.8 | 1.4 | 15 ± 1.5 | 1.0 | 0.80 | n.s. | ||
| Midgut | 18 ± 2.7 | 2.1 | 22 ± 2.5 | 1.4 | 0.85 | n.s. | 24 ± 1.2 | 1.4 |
| Hindgut | 13 ± 0.6 | 1.5 | 13 ± 0.9 | 0.9 | 1.02 | n.s. | 14 ± 4.3 | 0.8 |
| Malpighian Tubules | 13 ± 1.7 | 1.4 | 14 ± 0.3 | 0.9 | 0.91 | n.s. | 15 ± 1.1 | 0.9 |
| Rectal pad | 11 ± 0.4 | 1.3 | 12 ± 0.1 | 0.8 | 0.97 | n.s. | ||
| Salivary gland | 12 ± 2.2 | 1.4 | 12 ± 1.3 | 0.8 | 1.00 | n.s. | 22 ± 1.1 | 1.3 |
| Fat body | 6.4 ± 3.1 | 0.7 | 4.5 ± 0.2 | 0.3 | 1.41 | n.s. | 20 ± 0.3 | 1.2 |
| Heart | 12 ± 1.6 | 1.4 | 11 ± 0.9 | 0.7 | 1.12 | n.s. | ||
| Trachea | 25 ± 1.5 | 1.5 | ||||||
| Ovary | 16 ± 3.9 | 1.1 | ||||||
| Virgin Spermatheca | 5.8 ± 1.1 | 0.4 | ||||||
| Mated Spermatheca | 5.0 ± 1.5 | 0.3 | ||||||
| Testis | 19 ± 1.9 | 2.1 | ||||||
| Accessory glands | 12 ± 2.1 | 1.4 | ||||||
| Carcass | 10 ± 0.8 | 1.2 | 8.1 ± 1.3 | 0.5 | 1.25 | n.s. | 16 ± 2.2 | 0.9 |
| Garland cells | 7.8 ± 0.7 | 0.5 | ||||||
| Whole body | 8.7 ± 1.1 | 15 ± 1.3 | 0.58 | p < 0.01 | 17 ± 2.7 | |||
Rotate to see Transcript Table
| Transcript | Male | Female | Larval | ||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Name | ID | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Rp | Sg | Fb | Ht | Ts | Ag | Cs | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Rp | Sg | Fb | Ht | Ov | Vs | Ms | Cs | Ns | Mg | Hg | Tu | Sg | Fb | Tr | Cs | Ga |
| RC | FBtr0300570 | ||||||||||||||||||||||||||||||||||||||||
| RE | FBtr0334594 | ||||||||||||||||||||||||||||||||||||||||
*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.
See Docs for info on the chemistry used to sequence different tissues.