FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
her
Name
hermaphrodite
Annotation Symbol
CG4694
FlyBase ID
FBgn0001185
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head4.5 ± 0.31.84.4 ± 0.21.51.03n.s.  
Eye6.7 ± 1.02.75.7 ± 0.11.91.18n.s.  
Brain / CNS6.2 ± 0.22.55.7 ± 0.71.91.10n.s.6.8 ± 0.02.2
Thoracicoabdominal ganglion5.5 ± 0.12.25.2 ± 0.31.81.07n.s.  
Crop5.2 ± 0.32.13.9 ± 1.31.31.33n.s.  
Midgut4.5 ± 0.71.82.7 ± 0.70.91.65p < 0.053.9 ± 0.41.3
Hindgut5.3 ± 0.72.15.1 ± 0.21.71.04n.s.4.1 ± 0.61.3
Malpighian Tubules5.2 ± 0.32.14.9 ± 1.41.71.05n.s.4.0 ± 0.41.3
Rectal pad4.7 ± 0.31.93.5 ± 0.31.21.33n.s.  
Salivary gland5.2 ± 0.22.14.2 ± 0.01.41.25n.s.4.8 ± 0.41.6
Fat body1.8 ± 1.10.71.9 ± 0.40.71.00n.s.2.5 ± 0.50.8
Heart2.4 ± 0.21.02.5 ± 1.60.80.98n.s.  
Trachea      4.8 ± 0.31.6
Ovary  3.8 ± 0.11.3    
Virgin Spermatheca  2.3 ± 0.20.8    
Mated Spermatheca  3.1 ± 0.71.1    
Testis2.2 ± 0.50.9      
Accessory glands3.2 ± 0.61.3      
Carcass3.6 ± 0.41.43.5 ± 0.11.21.04n.s.3.4 ± 0.41.1
Garland cells      2.9 ± 0.60.9
Whole body2.5 ± 0.12.9 ± 0.20.86n.s.3.1 ± 0.4
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0080883
RBFBtr0335138
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.