FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
eIF3c
Name
eukaryotic translation initiation factor 3 subunit c
Annotation Symbol
CG4954
FlyBase ID
FBgn0034258
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head21 ± 1.70.744 ± 120.90.49n.s.  
Eye35 ± 3.31.254 ± 0.91.10.64n.s.  
Brain / CNS20 ± 0.20.720 ± 0.60.41.02n.s.57 ± 2.51.3
Thoracicoabdominal ganglion34 ± 5.81.235 ± 1.20.70.97n.s.  
Crop42 ± 4.01.436 ± 9.90.71.16n.s.  
Midgut39 ± 2.51.340 ± 2.20.80.97n.s.41 ± 0.40.9
Hindgut44 ± 2.61.552 ± 1.51.00.86p < 0.0553 ± 161.2
Malpighian Tubules39 ± 9.11.348 ± 7.40.90.81n.s.55 ± 4.21.2
Fat body32 ± 1.51.157 ± 1.71.10.55p < 0.01107 ± 9.22.4
Salivary gland69 ± 2.92.469 ± 3.81.41.00n.s.99 ± 6.02.2
Heartpendingpending  
Trachea      71 ± 1.01.6
Ovary  55 ± 5.01.1    
Virgin Spermatheca  47 ± 4.20.9    
Mated Spermatheca  55 ± 7.01.1    
Testis29 ± 2.41.0      
Accessory glands142 ± 124.9      
Carcass38 ± 2.01.361 ± 5.01.20.63p < 0.0145 ± 0.51.0
Rectal pad35 ± 3.21.235 ± 0.40.70.99n.s.  
Whole body29 ± 2.851 ± 2.00.57p < 0.0144 ± 1.6
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCs
RAFBtr0086836
RBFBtr0340269
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Tissue Comparability
Adult fat body and spermatheca were sequenced using a different chemistry from the other tissues (see Docs). The results for these tissues are comparable within this group, but not with other tissues. The identification of their individual transcripts is also less rigorous.