FlyAtlas 2: The RNAseq-based atlas of Drosophila gene expression

Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
CCT4

Name
Chaperonin containing TCP1 subunit 4

Annotation Symbol
CG5525

FlyBase ID
FBgn0032444

Paralogues
Paralogues(s)

SDs Whole Body Male v. Female

Gene FPKMs and Enrichments

	Adult Male		Adult Female		Male v. Female		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment	M/F	p value	FPKM	Enrichment
Head	12 ± 2.2	0.9	17 ± 4.8	0.3	0.70	n.s.
Eye	16 ± 0.1	1.2	24 ± 2.1	0.4	0.69	n.s.
Brain / CNS	12 ± 0.5	0.9	13 ± 0.8	0.2	0.93	n.s.	58 ± 3.5	1.7
Thoracicoabdominal ganglion	15 ± 1.3	1.1	19 ± 1.4	0.3	0.79	n.s.
Crop	30 ± 1.4	2.2	42 ± 9.8	0.8	0.71	n.s.
Midgut	28 ± 3.0	2.0	40 ± 3.2	0.7	0.70	p < 0.01	26 ± 0.5	0.8
Hindgut	38 ± 0.2	2.7	39 ± 1.9	0.7	0.97	n.s.	34 ± 12	1.0
Malpighian Tubules	19 ± 5.6	1.4	26 ± 3.2	0.5	0.74	n.s.	23 ± 1.7	0.7
Rectal pad	22 ± 1.5	1.6	30 ± 0.7	0.6	0.72	n.s.
Salivary gland	16 ± 0.3	1.2	28 ± 13	0.5	0.59	n.s.	40 ± 1.4	1.2
Fat body	8.9 ± 1.6	0.6	11 ± 2.4	0.2	0.80	n.s.	43 ± 7.3	1.3
Heart	29 ± 5.0	2.1	38 ± 9.3	0.7	0.76	n.s.
Trachea							59 ± 6.1	1.8
Ovary			66 ± 1.4	1.2
Virgin Spermatheca			9.2 ± 1.3	0.2
Mated Spermatheca			12 ± 3.5	0.2
Testis	32 ± 2.1	2.3
Accessory glands	25 ± 0.5	1.8
Carcass	15 ± 1.6	1.1	29 ± 5.2	0.5	0.52	p < 0.05	41 ± 1.1	1.2
Garland cells							18 ± 2.1	0.5

Whole body	14 ± 1.6		54 ± 2.2		0.26	p < 0.01	33 ± 4.7

Rotate to see Transcript Table

View in UCSC Genome Browser

Transcript FPKMs

Transcript		Male															Female																Larval
Name	ID	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ts	Ag	Cs	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ov	Vs	Ms	Cs	Ns	Mg	Hg	Tu	Sg	Fb	Tr	Cs	Ga
RA	FBtr0080411

*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.