FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
MsrA
Name
Methionine sulfoxide reductase A
Annotation Symbol
CG7266
FlyBase ID
FBgn0000565
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head37 ± 5.11.283 ± 762.20.45n.s.  
Eye34 ± 5.21.172 ± 9.71.90.48n.s.  
Brain / CNS47 ± 2.51.660 ± 8.41.60.78n.s.15 ± 2.50.1
Thoracicoabdominal ganglion63 ± 1.82.178 ± 2.02.10.80p < 0.05  
Crop17 ± 6.90.636 ± 6.10.90.48n.s.  
Midgut231 ± 807.7346 ± 539.10.67n.s.14 ± 5.10.1
Hindgut11 ± 4.90.415 ± 9.70.40.71n.s.9.3 ± 3.40.1
Malpighian Tubules19 ± 3.80.619 ± 4.20.50.99n.s.11 ± 4.30.1
Rectal pad18 ± 1.10.616 ± 0.40.41.12n.s.  
Salivary gland55 ± 5.01.838 ± 1.01.01.42n.s.12 ± 1.00.1
Fat body8.2 ± 1.40.364 ± 251.70.13n.s.90 ± 550.8
Heart13 ± 5.20.478 ± 612.10.16n.s.  
Trachea      33 ± 3.20.3
Ovary  18 ± 2.40.5    
Virgin Spermatheca  9.6 ± 5.30.3    
Mated Spermatheca  55 ± 371.5    
Testis10 ± 1.50.3      
Accessory glands13 ± 100.4      
Carcass44 ± 1.31.574 ± 702.00.59n.s.208 ± 931.9
Garland cells      21 ± 180.2
Whole body30 ± 5.838 ± 110.79n.s.108 ± 52
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RBFBtr0075554
RCFBtr0075552
REFBtr0303531
RFFBtr0330176
RGFBtr0330177
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*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.
WARNING: Transcript Ambiguity for this Gene!
Because FlyBase assigns a unique transcript name and identifier for each unique protein, the rare cases in which such proteins result from alternative translation of the same mRNA give rise to situations in which there are two or more different identifiers for the same physical transcript. RNAseq analysis can only deal with unique sequences, and in such cases arbitrarily assigns the data from a sequence to one of the different transcript identifiers. The result is that some named transcripts will be missing, or data for some transcripts will actually include that for others. In the case of gene FBgn0000565 the situation is:

No data for FBtr0075553 — included in FBtr0330177: Alternative Stop codons (readthrough)

*** More extensive information about transcript ambiguity and its implications can be found in the Docs ***