FlyAtlas 2: The RNAseq-based atlas of Drosophila gene expression

Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
128up

Name
upstream of RpIII128

Annotation Symbol
CG8340

FlyBase ID
FBgn0010339

Paralogues
Paralogues(s)

SDs Whole Body Male v. Female

Gene FPKMs and Enrichments

	Adult Male		Adult Female		Male v. Female		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment	M/F	p value	FPKM	Enrichment
Head	10 ± 0.2	0.9	13 ± 2.8	0.5	0.75	n.s.
Eye	11 ± 1.5	1.0	15 ± 2.4	0.6	0.77	n.s.
Brain / CNS	7.2 ± 0.6	0.6	7.0 ± 0.3	0.3	1.04	n.s.	17 ± 1.2	1.3
Thoracicoabdominal ganglion	10 ± 0.1	0.9	11 ± 0.6	0.4	0.95	n.s.
Crop	15 ± 2.5	1.4	17 ± 5.1	0.7	0.88	n.s.
Midgut	13 ± 0.7	1.1	19 ± 1.6	0.8	0.64	p < 0.01	8.6 ± 1.6	0.7
Hindgut	11 ± 0.1	1.0	15 ± 0.7	0.6	0.73	p < 0.01	11 ± 3.2	0.9
Malpighian Tubules	13 ± 0.7	1.2	17 ± 0.9	0.7	0.78	p < 0.01	9.9 ± 2.5	0.8
Rectal pad	9.5 ± 0.6	0.9	11 ± 1.3	0.4	0.90	n.s.
Salivary gland	14 ± 0.2	1.3	19 ± 5.7	0.8	0.74	n.s.	30 ± 1.8	2.4
Fat body	5.9 ± 2.2	0.5	9.8 ± 2.2	0.4	0.60	n.s.	42 ± 3.6	3.3
Heart	14 ± 3.2	1.3	19 ± 6.0	0.7	0.76	n.s.
Trachea							22 ± 1.6	1.7
Ovary			36 ± 3.2	1.4
Virgin Spermatheca			8.2 ± 0.4	0.3
Mated Spermatheca			8.5 ± 1.3	0.3
Testis	40 ± 4.5	3.6
Accessory glands	31 ± 0.8	2.8
Carcass	12 ± 0.2	1.0	17 ± 2.0	0.7	0.67	p < 0.05	16 ± 3.9	1.3
Garland cells							6.8 ± 0.9	0.5

Whole body	11 ± 1.1		25 ± 2.6		0.44	p < 0.01	13 ± 1.9

Rotate to see Transcript Table

View in UCSC Genome Browser

Transcript FPKMs

Transcript		Male															Female																Larval
Name	ID	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ts	Ag	Cs	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ov	Vs	Ms	Cs	Ns	Mg	Hg	Tu	Sg	Fb	Tr	Cs	Ga
RA	FBtr0087976

*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.