FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
 cg
Name
 combgap
Annotation Symbol
 CG8367
FlyBase ID
FBgn0000289
Paralogues
 Paralogues(s)
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head19 ± 1.41.820 ± 4.81.00.94n.s.  
Eye23 ± 1.12.119 ± 1.61.01.21n.s.  
Brain / CNS36 ± 2.13.433 ± 6.81.71.09n.s.26 ± 1.33.7
Thoracicoabdominal ganglion21 ± 1.62.023 ± 2.51.20.91n.s.  
Crop11 ± 2.51.19.2 ± 1.90.51.25n.s.  
Midgut13 ± 0.71.39.5 ± 0.10.51.41p < 0.017.2 ± 0.61.0
Hindgut9.9 ± 0.60.913 ± 0.90.70.78p < 0.056.3 ± 1.40.9
Malpighian Tubules10 ± 1.81.011 ± 2.40.60.94n.s.5.7 ± 1.20.8
Rectal pad7.2 ± 0.40.78.1 ± 0.00.40.89n.s.  
Salivary gland18 ± 0.21.718 ± 2.20.90.99n.s.19 ± 0.62.7
Fat body7.2 ± 1.10.79.8 ± 0.90.50.73p < 0.059.3 ± 0.61.3
Heart9.8 ± 0.90.919 ± 111.00.50n.s.  
Trachea      12 ± 0.91.7
Ovary  23 ± 0.91.2    
Virgin Spermatheca  15 ± 1.30.8    
Mated Spermatheca  14 ± 0.70.8    
Testis13 ± 0.31.2      
Accessory glands16 ± 1.41.5      
Carcass11 ± 0.71.014 ± 2.30.70.79n.s.11 ± 3.11.6
Garland cells      10 ± 2.01.5
Whole body11 ± 0.919 ± 2.10.56p < 0.057.0 ± 0.0
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Rotate to see Transcript Table
View in UCSC Genome Browser
Transcript FPKMs 
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0087529
RBFBtr0087527
RCFBtr0087528
RDFBtr0087526
RFFBtr0112795
RIFBtr0290034
RJFBtr0290035
RKFBtr0339960
RLFBtr0339961
RMFBtr0339962
RNFBtr0346946
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*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.