FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
Shal
Name
Shaker cognate l
Annotation Symbol
CG9262
FlyBase ID
FBgn0005564
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head13 ± 1.43.610 ± 1.65.01.30n.s.  
Eye11 ± 2.13.18.1 ± 1.34.11.39n.s.  
Brain / CNS30 ± 1.88.325 ± 4.2121.21n.s.8.3 ± 0.34.1
Thoracicoabdominal ganglion20 ± 3.75.421 ± 3.8110.91n.s.  
Crop10 ± 1.02.89.8 ± 2.64.91.02n.s.  
Midgut1.6 ± 0.30.40.8 ± 0.2N.A.1.00p < 0.051.8 ± 0.5N.A.
Hindgut2.1 ± 0.00.62.0 ± 0.2N.A.1.05n.s.2.9 ± 0.71.5
Malpighian Tubules0.2 ± 0.10.10.4 ± 0.2N.A.1.00n.s.0.3 ± 0.1N.A.
Fat body0.4 ± 0.30.10.6 ± 0.2N.A.1.00n.s.0.2 ± 0.1N.A.
Salivary gland1.0 ± 0.10.30.5 ± 0.1N.A.1.00n.s.0.5 ± 0.0N.A.
Heartpendingpending  
Trachea      1.2 ± 0.3N.A.
Ovary  0.2 ± 0.1N.A.    
Virgin Spermatheca  0.7 ± 0.4N.A.    
Mated Spermatheca  1.3 ± 0.4N.A.    
Testis0.6 ± 0.10.2      
Accessory glands0.3 ± 0.10.1      
Carcass2.1 ± 0.60.61.3 ± 0.5N.A.1.03n.s.1.9 ± 0.4N.A.
Rectal pad2.8 ± 0.50.84.6 ± 0.02.30.61n.s.  
Whole body3.6 ± 0.21.1 ± 0.11.82p < 0.010.8 ± 0.3
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCs
RAFBtr0074973
RBFBtr0112853
RCFBtr0333273
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Tissue Comparability
Adult fat body and spermatheca were sequenced using a different chemistry from the other tissues (see Docs). The results for these tissues are comparable within this group, but not with other tissues. The identification of their individual transcripts is also less rigorous.