FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Rh4
Name
Rhodopsin 4
Annotation Symbol
CG9668
FlyBase ID
FBgn0003250
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head195 ± 1.75.4187 ± 17231.04n.s.  
Eye1924 ± 28541450 ± 311781.33p < 0.01  
Brain / CNS1.5 ± 1.00.02.7 ± 1.10.30.75n.s.0.1 ± 0.1N.A.
Thoracicoabdominal ganglion0.1 ± 0.00.00.6 ± 0.00.11.00p < 0.01  
Crop2.1 ± 1.80.14.9 ± 2.70.60.42n.s.  
Midgut0.0 ± 0.00.00.1 ± 0.10.01.00n.s.0.1 ± 0.1N.A.
Hindgut0.0 ± 0.00.00.0 ± 0.00.01.00n.s.0.4 ± 0.6N.A.
Malpighian Tubules0.3 ± 0.50.00.1 ± 0.10.01.00n.s.0.1 ± 0.0N.A.
Rectal pad0.0 ± 0.00.00.5 ± 0.50.11.00n.s.  
Salivary gland6.8 ± 1.80.23.7 ± 0.20.51.83n.s.0.0 ± 0.0N.A.
Fat body0.1 ± 0.10.00.0 ± 0.00.01.00n.s.0.2 ± 0.3N.A.
Heart0.1 ± 0.10.00.2 ± 0.30.01.00n.s.  
Trachea      0.0 ± 0.0N.A.
Ovary  0.1 ± 0.20.0    
Virgin Spermatheca  0.3 ± 0.50.0    
Mated Spermatheca  0.1 ± 0.10.0    
Testis6.6 ± 0.40.2      
Accessory glands0.0 ± 0.00.0      
Carcass0.7 ± 0.90.00.4 ± 0.30.01.00n.s.0.1 ± 0.1N.A.
Garland cells      0.1 ± 0.1N.A.
Whole body36 ± 6.68.1 ± 0.34.4p < 0.050.1 ± 0.1
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0075338
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*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.