FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
Hdc
Name
Histidine decarboxylase
Annotation Symbol
CG3454
FlyBase ID
FBgn0005619
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head7.5 ± 0.63.46.8 ± 1.73.41.10n.s.  
Eye34 ± 9.31524 ± 2.3121.37n.s.  
Brain / CNS0.7 ± 0.10.30.6 ± 0.1N.A.1.00n.s.0.3 ± 0.0N.A.
Thoracicoabdominal ganglion0.9 ± 0.10.41.2 ± 0.0N.A.1.00n.s.  
Crop0.2 ± 0.10.10.1 ± 0.0N.A.1.00n.s.  
Midgut0.0 ± 0.00.00.0 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Hindgut0.0 ± 0.00.00.0 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Malpighian Tubules0.0 ± 0.00.00.0 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Fat body0.0 ± 0.00.00.1 ± 0.1N.A.1.00n.s.0.0 ± 0.0N.A.
Salivary gland0.3 ± 0.00.10.1 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Heartpendingpending  
Trachea      0.0 ± 0.0N.A.
Ovary  0.0 ± 0.0N.A.    
Virgin Spermatheca  0.0 ± 0.0N.A.    
Mated Spermatheca  0.0 ± 0.0N.A.    
Testis0.0 ± 0.00.0      
Accessory glands0.0 ± 0.00.0      
Carcass0.4 ± 0.10.20.2 ± 0.0N.A.1.00p < 0.050.0 ± 0.0N.A.
Rectal pad0.0 ± 0.00.00.0 ± 0.0N.A.1.00n.s.  
Whole body2.2 ± 0.20.5 ± 0.11.12p < 0.010.0 ± 0.0
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCs
RAFBtr0088333
RBFBtr0331923
RCFBtr0331924
RDFBtr0345474
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Tissue Comparability
Adult fat body and spermatheca were sequenced using a different chemistry from the other tissues (see Docs). The results for these tissues are comparable within this group, but not with other tissues. The identification of their individual transcripts is also less rigorous.