FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
sca
Name
scabrous
Annotation Symbol
CG17579
FlyBase ID
FBgn0003326
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head3.1 ± 0.51.52.7 ± 0.51.41.13n.s.  
Eye0.7 ± 0.1N.A.0.6 ± 0.1N.A.1.00n.s.  
Brain / CNS8.1 ± 0.24.07.0 ± 1.13.51.16n.s.9.7 ± 1.24.9
Thoracicoabdominal ganglion4.2 ± 0.82.14.6 ± 0.42.30.91n.s.  
Crop0.1 ± 0.0N.A.0.1 ± 0.1N.A.1.00n.s.  
Midgut0.0 ± 0.0N.A.0.1 ± 0.0N.A.1.00n.s.0.1 ± 0.1N.A.
Hindgut0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.0.1 ± 0.1N.A.
Malpighian Tubules0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.0.0 ± 0.0N.A.
Rectal pad0.0 ± 0.0N.A.0.1 ± 0.1N.A.1.00n.s.  
Salivary gland0.1 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.0.3 ± 0.1N.A.
Fat body0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.0.2 ± 0.2N.A.
Heart0.0 ± 0.0N.A.0.0 ± 0.0N.A.1.00n.s.  
Trachea      0.3 ± 0.1N.A.
Ovary  0.0 ± 0.0N.A.    
Virgin Spermatheca  0.0 ± 0.0N.A.    
Mated Spermatheca  0.1 ± 0.1N.A.    
Testis0.0 ± 0.0N.A.      
Accessory glands0.0 ± 0.0N.A.      
Carcass0.3 ± 0.1N.A.0.2 ± 0.1N.A.1.00n.s.1.7 ± 0.2N.A.
Garland cells      0.7 ± 0.6N.A.
Whole body0.5 ± 0.10.3 ± 0.11.00p < 0.051.3 ± 0.4
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0087855
RBFBtr0087856
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.