FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
 shd
Name
 shade
Annotation Symbol
 CG13478
FlyBase ID
FBgn0003388
Paralogues
 Paralogues(s)
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head0.5 ± 0.4N.A.0.7 ± 0.1N.A.1.00n.s.  
Eye0.5 ± 0.3N.A.0.4 ± 0.1N.A.1.00n.s.  
Brain / CNS0.1 ± 0.1N.A.0.1 ± 0.0N.A.1.00n.s.0.2 ± 0.10.0
Thoracicoabdominal ganglion0.3 ± 0.0N.A.0.5 ± 0.0N.A.1.00n.s.  
Crop0.2 ± 0.1N.A.0.1 ± 0.1N.A.1.00n.s.  
Midgut1.6 ± 0.1N.A.2.1 ± 1.11.00.97n.s.147 ± 104.9
Hindgut0.7 ± 0.2N.A.1.5 ± 0.1N.A.1.00p < 0.012.0 ± 1.30.1
Malpighian Tubules0.1 ± 0.1N.A.0.2 ± 0.1N.A.1.00n.s.21 ± 3.70.7
Rectal pad0.0 ± 0.0N.A.0.1 ± 0.0N.A.1.00n.s.  
Salivary gland1.7 ± 0.2N.A.0.8 ± 0.2N.A.1.00n.s.1.7 ± 0.20.1
Fat body1.7 ± 1.0N.A.1.4 ± 0.6N.A.1.00n.s.51 ± 7.81.7
Heart1.7 ± 0.2N.A.1.1 ± 0.4N.A.1.00n.s.  
Trachea      2.2 ± 0.50.1
Ovary  0.2 ± 0.1N.A.    
Virgin Spermatheca  0.2 ± 0.2N.A.    
Mated Spermatheca  0.4 ± 0.2N.A.    
Testis6.8 ± 0.33.4      
Accessory glands0.1 ± 0.0N.A.      
Carcass1.1 ± 0.3N.A.0.6 ± 0.2N.A.1.00n.s.5.1 ± 1.50.2
Garland cells      13 ± 7.80.4
Whole body1.3 ± 0.20.5 ± 0.01.00p < 0.0530 ± 2.4
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View in UCSC Genome Browser
Transcript FPKMs 
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RBFBtr0075676
RCFBtr0304700
RDFBtr0333031
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.