FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
bnl
Name
branchless
Annotation Symbol
CG4608
FlyBase ID
FBgn0014135
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head1.5 ± 0.4N.A.1.5 ± 0.3N.A.1.00n.s.  
Eye1.7 ± 0.1N.A.1.0 ± 0.1N.A.1.00n.s.  
Brain / CNS0.7 ± 0.2N.A.0.6 ± 0.1N.A.1.00n.s.0.6 ± 0.2N.A.
Thoracicoabdominal ganglion1.7 ± 0.2N.A.1.9 ± 0.1N.A.1.00n.s.  
Crop1.5 ± 0.4N.A.0.9 ± 0.0N.A.1.00n.s.  
Midgut3.5 ± 0.91.74.8 ± 0.72.40.72n.s.3.4 ± 1.91.7
Hindgut9.1 ± 1.24.56.2 ± 1.13.11.46p < 0.051.9 ± 0.6N.A.
Malpighian Tubules9.1 ± 1.74.56.5 ± 0.83.31.39n.s.6.1 ± 0.23.1
Rectal pad2.9 ± 0.11.51.9 ± 0.1N.A.1.46n.s.  
Salivary gland5.8 ± 0.62.93.7 ± 1.01.91.56n.s.0.1 ± 0.1N.A.
Fat body3.3 ± 0.81.63.6 ± 0.31.80.93n.s.0.8 ± 0.1N.A.
Heart7.7 ± 1.63.88.4 ± 6.44.20.92n.s.  
Trachea      10 ± 3.25.2
Ovary  0.1 ± 0.1N.A.    
Virgin Spermatheca  1.7 ± 0.3N.A.    
Mated Spermatheca  2.9 ± 0.31.5    
Testis1.5 ± 0.3N.A.      
Accessory glands0.6 ± 0.1N.A.      
Carcass3.3 ± 0.21.73.1 ± 0.91.61.07n.s.1.2 ± 0.2N.A.
Garland cells      3.5 ± 1.31.8
Whole body1.9 ± 0.30.9 ± 0.01.00p < 0.051.7 ± 1.1
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0083795
RCFBtr0300123
RDFBtr0344549
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.