FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Rab4
Name
Rab4
Annotation Symbol
CG4921
FlyBase ID
FBgn0016701
Paralogues
Paralogues(s)
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head39 ± 1.21.438 ± 1.01.81.03n.s.  
Eye51 ± 0.21.846 ± 0.62.21.11n.s.  
Brain / CNS39 ± 1.41.440 ± 2.11.90.99n.s.23 ± 1.90.8
Thoracicoabdominal ganglion37 ± 3.91.339 ± 1.41.80.95n.s.  
Crop40 ± 1.61.435 ± 1.41.61.15n.s.  
Midgut27 ± 1.00.921 ± 2.61.01.25n.s.38 ± 1.81.4
Hindgut52 ± 0.41.952 ± 0.92.41.00n.s.38 ± 9.41.4
Malpighian Tubules81 ± 7.32.979 ± 3.93.71.03n.s.49 ± 4.91.8
Rectal pad57 ± 1.72.047 ± 2.82.21.20n.s.  
Salivary gland55 ± 0.02.035 ± 4.31.61.56n.s.31 ± 3.81.1
Fat body30 ± 3.51.121 ± 3.81.01.42p < 0.0522 ± 3.70.8
Heart36 ± 3.41.323 ± 8.31.11.56n.s.  
Trachea      26 ± 1.41.0
Ovary  23 ± 1.21.1    
Virgin Spermatheca  27 ± 3.51.2    
Mated Spermatheca  27 ± 4.51.3    
Testis12 ± 0.90.4      
Accessory glands69 ± 5.62.5      
Carcass37 ± 1.31.332 ± 2.31.51.15n.s.22 ± 1.30.8
Garland cells      32 ± 4.01.2
Whole body28 ± 2.921 ± 1.31.31p < 0.0527 ± 1.9
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0086830
RBFBtr0086829
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.