FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
CG3909
Annotation Symbol
CG3909
FlyBase ID
FBgn0027524
Paralogues
Paralogues(s)
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head5.7 ± 2.40.87.5 ± 0.50.80.76n.s.  
Eye8.4 ± 0.21.28.7 ± 1.00.90.97n.s.  
Brain / CNS5.7 ± 0.10.86.0 ± 0.20.60.94n.s.12 ± 1.11.2
Thoracicoabdominal ganglion7.7 ± 0.81.16.9 ± 0.20.71.12n.s.  
Crop9.5 ± 1.11.49.9 ± 1.31.10.96n.s.  
Midgut8.5 ± 0.91.28.3 ± 1.00.91.02n.s.6.9 ± 0.20.7
Hindgut8.5 ± 1.11.28.0 ± 0.40.91.07n.s.7.4 ± 2.10.8
Malpighian Tubules7.3 ± 1.31.16.6 ± 2.50.71.11n.s.7.0 ± 0.20.7
Rectal pad8.2 ± 0.71.28.2 ± 0.40.90.99n.s.  
Salivary gland8.8 ± 0.11.39.2 ± 2.71.00.95n.s.18 ± 1.01.8
Fat body6.1 ± 1.60.98.2 ± 2.10.90.74n.s.12 ± 1.41.3
Heart9.6 ± 1.91.49.1 ± 5.41.01.05n.s.  
Trachea      9.7 ± 0.71.0
Ovary  10 ± 0.61.1    
Virgin Spermatheca  5.6 ± 1.90.6    
Mated Spermatheca  7.9 ± 2.30.8    
Testis25 ± 2.63.7      
Accessory glands16 ± 3.22.4      
Carcass7.5 ± 1.01.17.5 ± 0.90.81.00n.s.11 ± 1.51.1
Garland cells      8.2 ± 3.20.8
Whole body6.8 ± 0.69.3 ± 2.10.73n.s.9.7 ± 1.1
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0082172
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.