FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
CG3309
Annotation Symbol
CG3309
FlyBase ID
FBgn0029756
Paralogues
No paralogues
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head2.7 ± 0.11.43.0 ± 0.60.50.91n.s.  
Eye4.2 ± 0.12.13.9 ± 0.10.71.08n.s.  
Brain / CNS3.0 ± 0.11.53.4 ± 0.00.60.89p < 0.052.1 ± 0.31.1
Thoracicoabdominal ganglion3.0 ± 0.31.53.2 ± 0.10.60.92n.s.  
Crop2.1 ± 0.11.01.9 ± 0.70.31.03n.s.  
Midgut1.4 ± 0.2N.A.1.1 ± 0.10.21.00n.s.1.6 ± 0.2N.A.
Hindgut1.3 ± 0.3N.A.1.4 ± 0.30.31.00n.s.1.2 ± 0.4N.A.
Malpighian Tubules2.5 ± 0.21.32.3 ± 0.50.41.09n.s.2.6 ± 0.31.3
Rectal pad2.0 ± 0.3N.A.1.7 ± 0.00.31.00n.s.  
Salivary gland2.1 ± 0.51.03.2 ± 1.10.60.65n.s.2.2 ± 0.61.1
Fat body0.9 ± 0.3N.A.0.9 ± 0.30.21.00n.s.1.9 ± 0.3N.A.
Heart3.3 ± 0.61.64.2 ± 2.60.70.79n.s.  
Trachea      2.5 ± 0.41.2
Ovary  6.8 ± 0.11.2    
Virgin Spermatheca  0.9 ± 0.30.2    
Mated Spermatheca  1.2 ± 0.30.2    
Testis2.4 ± 0.31.2      
Accessory glands1.9 ± 0.3N.A.      
Carcass2.0 ± 0.41.02.2 ± 0.20.40.89n.s.2.0 ± 0.4N.A.
Garland cells      1.5 ± 0.4N.A.
Whole body1.7 ± 0.45.6 ± 0.60.36p < 0.011.3 ± 0.3
download
Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0070798
RBFBtr0344827
download
*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.