FlyAtlas 2: The RNAseq-based atlas of Drosophila gene expression

Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
snoRNA:Me28S-G2703c

Name
snoRNA:Me28S-G2703c

Annotation Symbol
CR34541

FlyBase ID
FBgn0082929

Paralogues
No paralogues

SDs Whole Body Male v. Female

Gene FPKMs and Enrichments

	Adult Male		Adult Female		Male v. Female		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment	M/F	p value	FPKM	Enrichment
Head	0.0 ± 0.0	N.A.	31 ± 54	16	0.06	n.s.
Eye	0.0 ± 0.0	N.A.	115 ± 3.0	58	0.02	n.s.
Brain / CNS	72 ± 73	36	174 ± 72	87	0.42	n.s.	89 ± 78	0.6
Thoracicoabdominal ganglion	95 ± 20	47	50 ± 71	25	1.89	n.s.
Crop	47 ± 67	24	0.0 ± 0.0	N.A.	24	n.s.
Midgut	163 ± 282	82	224 ± 388	112	0.73	n.s.	68 ± 117	0.5
Hindgut	232 ± 401	116	0.0 ± 0.0	N.A.	116	n.s.	0.0 ± 0.0	0.0
Malpighian Tubules	50 ± 87	25	128 ± 221	64	0.40	n.s.	0.0 ± 0.0	0.0
Rectal pad	62 ± 54	31	99 ± 57	49	0.63	n.s.
Salivary gland	0.0 ± 0.0	N.A.	0.0 ± 0.0	N.A.	1.00	n.s.	0.0 ± 0.0	0.0
Fat body	28466 ± 8511	14233	21701 ± 7899	10850	1.31	n.s.	0.0 ± 0.0	0.0
Heart	0.0 ± 0.0	N.A.	0.0 ± 0.0	N.A.	1.00	n.s.
Trachea							142 ± 125	1.0
Ovary			0.0 ± 0.0	N.A.
Virgin Spermatheca			14679 ± 8369	7340
Mated Spermatheca			20923 ± 5075	10462
Testis	0.0 ± 0.0	N.A.
Accessory glands	612 ± 289	306
Carcass	0.0 ± 0.0	N.A.	256 ± 193	128	0.01	n.s.	0.0 ± 0.0	0.0
Garland cells							11501 ± 3972	81

Whole body	0.0 ± 0.0		0.0 ± 0.0		1.00	n.s.	142 ± 247

Rotate to see Transcript Table

View in UCSC Genome Browser

Transcript FPKMs

Transcript		Male															Female																Larval
Name	ID	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ts	Ag	Cs	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ov	Vs	Ms	Cs	Ns	Mg	Hg	Tu	Sg	Fb	Tr	Cs	Ga
RA	FBtr0113510

These data are for a snoRNA (small nucleolar RNA) that does not encode a protein.
There are two main classes of snoRNAs: 1. CD class snoRNAs, involved in rRNA methylation, which are generally not detected by our techniques as they are too small, and 2. ACC class snoRNAs, involved in pseudouridylation, which are generally large enough to be detected. (N.B. Data for Fat Body and Spermatheca may not be comparable with those from other tissues.)