FlyAtlas 2: The RNAseq-based atlas of Drosophila gene expression

Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
snoRNA:Psi28S-3436b

Name
snoRNA:Psi28S-3436b

Annotation Symbol
CR33799

FlyBase ID
FBgn0086602

Paralogues
No paralogues

SDs Whole Body Male v. Female

Gene FPKMs and Enrichments

	Adult Male		Adult Female		Male v. Female		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment	M/F	p value	FPKM	Enrichment
Head	2439 ± 912	6.2	3678 ± 4353	2.9	0.66	n.s.
Eye	269 ± 48	0.7	463 ± 81	0.4	0.58	n.s.
Brain / CNS	235 ± 42	0.6	362 ± 122	0.3	0.65	n.s.	215 ± 52	0.5
Thoracicoabdominal ganglion	603 ± 317	1.5	343 ± 16	0.3	1.76	n.s.
Crop	470 ± 215	1.2	850 ± 53	0.7	0.55	n.s.
Midgut	320 ± 17	0.8	704 ± 181	0.6	0.45	n.s.	230 ± 34	0.5
Hindgut	423 ± 77	1.1	452 ± 27	0.4	0.94	n.s.	201 ± 29	0.5
Malpighian Tubules	535 ± 345	1.4	1011 ± 867	0.8	0.53	n.s.	148 ± 28	0.3
Rectal pad	453 ± 56	1.2	599 ± 37	0.5	0.76	n.s.
Salivary gland	255 ± 40	0.7	315 ± 72	0.2	0.81	n.s.	304 ± 70	0.7
Fat body	551 ± 139	1.4	813 ± 224	0.6	0.68	n.s.	366 ± 46	0.8
Heart	3762 ± 1586	9.6	2729 ± 1800	2.1	1.38	n.s.
Trachea							520 ± 134	1.2
Ovary			782 ± 495	0.6
Virgin Spermatheca			1483 ± 546	1.2
Mated Spermatheca			967 ± 243	0.8
Testis	335 ± 246	0.9
Accessory glands	742 ± 93	1.9
Carcass	413 ± 188	1.1	708 ± 96	0.6	0.58	n.s.	399 ± 47	0.9
Garland cells							396 ± 150	0.9

Whole body	391 ± 138		1278 ± 926		0.31	n.s.	446 ± 56

Rotate to see Transcript Table

View in UCSC Genome Browser

Transcript FPKMs

Transcript		Male															Female																Larval
Name	ID	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ts	Ag	Cs	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ov	Vs	Ms	Cs	Ns	Mg	Hg	Tu	Sg	Fb	Tr	Cs	Ga
RA	FBtr0091803

These data are for a snoRNA (small nucleolar RNA) that does not encode a protein.
There are two main classes of snoRNAs: 1. CD class snoRNAs, involved in rRNA methylation, which are generally not detected by our techniques as they are too small, and 2. ACC class snoRNAs, involved in pseudouridylation, which are generally large enough to be detected. (N.B. Data for Fat Body and Spermatheca may not be comparable with those from other tissues.)