FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
mir-959
Name
mir-959 stem loop
Annotation Symbol
CR42963
FlyBase ID
FBgn0262256
Paralogues
No paralogues
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SDs   Whole Body   Male v. Female
MicroRNA TPMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueTPMEnrichmentTPMEnrichmentM/Fp valueTPMEnrichment
Head1.0 ± 3.00.00.0 ± 0.0n.a.1.00n.s.  
Eye1.0 ± 2.00.00.0 ± 0.0n.a.1.00n.s.  
Brain / CNS1.0 ± 1.00.00.0 ± 0.0n.a.1.00n.s.0.0 ± 0.00.0
Thoracicoabdominal ganglion4.0 ± 2.00.01.0 ± 1.0n.a.2.0n.s.  
Crop0.0 ± 0.00.00.0 ± 0.0n.a.1.00n.s.  
Midgut0.0 ± 1.00.00.0 ± 1.0n.a.1.00n.s.65 ± 1141.0
Hindgut1.0 ± 3.00.00.0 ± 0.0n.a.1.00n.s.0.0 ± 0.00.0
Malpighian Tubules5.0 ± 5.00.04.0 ± 3.0n.a.1.25n.s.76 ± 321.2
Rectal pad4.0 ± 8.00.07.0 ± 7.0n.a.0.57n.s.  
Salivary gland0.0 ± 0.00.00.0 ± 0.0n.a.1.00n.s.0.0 ± 0.00.0
Fat body0.0 ± 0.00.00.0 ± 0.0n.a.1.00n.s.87 ± 801.3
Heart30 ± 360.10.0 ± 0.0n.a.15n.s.  
Trachea      0.0 ± 3.00.0
Ovary  53 ± 252.6    
Virgin Spermatheca  0.0 ± 0.0n.a.    
Mated Spermatheca  0.0 ± 0.0n.a.    
Testis15291 ± 291155      
Accessory glands9.0 ± 160.0      
Carcass10 ± 7.00.03.0 ± 3.0n.a.3.3n.s.2.0 ± 3.00.0
Garland cells      41 ± 730.6
Whole body279 ± 823.0 ± 4.093p < 0.0566 ± 11
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Rotate to see Transcript Table
FBgn0262256MaleFemaleLarvalHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGaRB: FBtr0472770RA: FBtr03043520%100%
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These data are for a microRNA.
The data were processed separately from those for other genes, and have different units and heat-map ranges.
There are only two possible transcripts for the microRNAs — the cleavage products RA and RB. The relative proportions of the two are represented by the area that they occupy in the transcript graphic, with an indication of the total abundance being provided by the colour intensity.
Adult crop, salivary gland, fat body, spermatheca and heart were sequenced using a different chemistry from the other tissues, as were larval Garland cells.