FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
mir-1007
Name
mir-1007 stem loop
Annotation Symbol
CR43025
FlyBase ID
FBgn0262454
Paralogues
No paralogues
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SDs   Whole Body   Male v. Female
MicroRNA TPMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueTPMEnrichmentTPMEnrichmentM/Fp valueTPMEnrichment
Head25 ± 3.01.224 ± 8.01.21.04n.s.  
Eye22 ± 231.135 ± 411.80.63n.s.  
Brain / CNS41 ± 5.02.031 ± 171.61.32n.s.6.0 ± 1.00.1
Thoracicoabdominal ganglion29 ± 7.01.450 ± 222.50.58n.s.  
Crop35 ± 101.880 ± 1394.00.44n.s.  
Midgut42 ± 122.125 ± 211.21.68n.s.137 ± 201.3
Hindgut3.0 ± 4.0n.a.7.0 ± 4.0n.a.0.43n.s.17 ± 210.2
Malpighian Tubules4.0 ± 3.0n.a.1.0 ± 3.0n.a.2.0n.s.4.0 ± 3.00.0
Rectal pad3.0 ± 4.0n.a.7.0 ± 9.0n.a.0.43n.s.  
Salivary gland15 ± 13n.a.17 ± 17n.a.0.88n.s.4.0 ± 8.00.0
Fat body62 ± 343.1104 ± 1335.20.60n.s.16 ± 240.1
Heart80 ± 824.078 ± 1013.91.03n.s.  
Trachea      5.0 ± 4.00.0
Ovary  4.0 ± 8.0n.a.    
Virgin Spermatheca  26 ± 9.01.3    
Mated Spermatheca  16 ± 31n.a.    
Testis33 ± 261.6      
Accessory glands6.0 ± 5.0n.a.      
Carcass9.0 ± 6.0n.a.10 ± 5.0n.a.0.90n.s.8.0 ± 3.00.1
Garland cells      92 ± 810.9
Whole body9.0 ± 4.09.0 ± 2.01.00n.s.108 ± 14
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Rotate to see Transcript Table
FBgn0262454MaleFemaleLarvalHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGaRB: FBtr0472821RA: FBtr03044840%100%
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These data are for a microRNA.
The data were processed separately from those for other genes, and have different units and heat-map ranges.
There are only two possible transcripts for the microRNAs — the cleavage products RA and RB. The relative proportions of the two are represented by the area that they occupy in the transcript graphic, with an indication of the total abundance being provided by the colour intensity.
Adult crop, salivary gland, fat body, spermatheca and heart were sequenced using a different chemistry from the other tissues, as were larval Garland cells.