FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Pcf11
Name
Pcf11 cleavage and polyadenylation factor subunit
Annotation Symbol
CG10228
FlyBase ID
FBgn0264962
Paralogues
No paralogues
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head38 ± 2.31.439 ± 2.72.11.00n.s.  
Eye42 ± 5.01.539 ± 1.72.11.07n.s.  
Brain / CNS63 ± 2.42.366 ± 7.83.50.96n.s.30 ± 2.11.5
Thoracicoabdominal ganglion43 ± 1.71.544 ± 1.12.40.97n.s.  
Crop39 ± 1.51.430 ± 1.41.61.31n.s.  
Midgut35 ± 2.91.324 ± 2.81.31.47p < 0.0127 ± 2.01.4
Hindgut40 ± 1.41.441 ± 2.52.20.99n.s.24 ± 4.21.2
Malpighian Tubules42 ± 4.01.548 ± 6.42.60.87n.s.30 ± 2.91.5
Rectal pad33 ± 0.91.232 ± 3.81.71.03n.s.  
Salivary gland52 ± 1.51.944 ± 5.72.41.16n.s.46 ± 5.52.3
Fat body24 ± 2.10.924 ± 2.01.31.00n.s.24 ± 3.01.2
Heart23 ± 4.40.826 ± 6.71.40.89n.s.  
Trachea      27 ± 0.61.4
Ovary  18 ± 1.41.0    
Virgin Spermatheca  30 ± 2.31.6    
Mated Spermatheca  33 ± 4.61.8    
Testis21 ± 1.20.7      
Accessory glands76 ± 4.42.7      
Carcass34 ± 6.51.233 ± 4.61.81.04n.s.20 ± 0.11.0
Garland cells      28 ± 0.41.5
Whole body28 ± 1.019 ± 0.91.50p < 0.0120 ± 3.4
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RBFBtr0301513
RCFBtr0302109
RDFBtr0302294
REFBtr0302560
RFFBtr0339985
RGFBtr0339986
RHFBtr0345528
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.