FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
speck
Name
speck
Annotation Symbol
CG3318
FlyBase ID
FBgn0287831
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head53 ± 3.31.139 ± 2.02.61.37p < 0.01  
Eye27 ± 8.40.615 ± 0.91.01.82n.s.  
Brain / CNS40 ± 1.90.936 ± 0.52.41.13p < 0.056.6 ± 2.20.4
Thoracicoabdominal ganglion58 ± 6.01.257 ± 5.83.91.01n.s.  
Crop11 ± 5.90.28.8 ± 0.20.61.22n.s.  
Midgut294 ± 366.3151 ± 31101.96p < 0.0136 ± 6.82.1
Hindgut11 ± 3.70.210 ± 0.50.71.08n.s.1.6 ± 0.90.1
Malpighian Tubules17 ± 4.20.410 ± 1.10.71.69n.s.12 ± 1.40.7
Rectal pad5.2 ± 1.10.17.2 ± 1.30.50.72n.s.  
Salivary gland48 ± 9.11.016 ± 2.41.13.0n.s.0.8 ± 0.10.0
Fat body2.3 ± 1.40.02.0 ± 1.00.11.15n.s.9.6 ± 3.00.6
Heart5.1 ± 0.90.16.0 ± 2.10.40.86n.s.  
Trachea      1.9 ± 0.30.1
Ovary  1.2 ± 0.20.1    
Virgin Spermatheca  10 ± 3.80.7    
Mated Spermatheca  12 ± 1.10.8    
Testis6.2 ± 0.90.1      
Accessory glands34 ± 2.20.7      
Carcass44 ± 5.70.933 ± 7.02.21.34n.s.1.8 ± 0.10.1
Garland cells      2.4 ± 0.40.1
Whole body46 ± 7.715 ± 2.53.2p < 0.0517 ± 2.5
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0072254
RBFBtr0072255
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.