FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)
Gene:
Symbol
Usp47
Usp47
Name
Ubiquitin specific protease 47
Ubiquitin specific protease 47
Annotation Symbol
CG5486
CG5486
| Adult Male | Adult Female | Male v. Female | Larval | |||||
|---|---|---|---|---|---|---|---|---|
| Tissue | FPKM | Enrichment | FPKM | Enrichment | M/F | p value | FPKM | Enrichment |
| Head | 15 ± 1.5 | 0.6 | 19 ± 4.4 | 1.3 | 0.78 | n.s. | ||
| Eye | 21 ± 1.5 | 0.8 | 18 ± 0.1 | 1.2 | 1.15 | n.s. | ||
| Brain / CNS | 13 ± 0.4 | 0.5 | 12 ± 1.4 | 0.8 | 1.11 | n.s. | 16 ± 1.0 | 1.4 |
| Thoracicoabdominal ganglion | 19 ± 1.8 | 0.7 | 19 ± 0.3 | 1.2 | 1.00 | n.s. | ||
| Crop | 64 ± 4.3 | 2.4 | 50 ± 17 | 3.3 | 1.29 | n.s. | ||
| Midgut | 30 ± 3.6 | 1.1 | 25 ± 0.6 | 1.6 | 1.22 | n.s. | 26 ± 3.4 | 2.2 |
| Hindgut | 28 ± 2.6 | 1.0 | 29 ± 2.8 | 1.9 | 0.96 | n.s. | 23 ± 6.6 | 2.0 |
| Malpighian Tubules | 26 ± 4.4 | 0.9 | 26 ± 3.7 | 1.7 | 0.97 | n.s. | 17 ± 4.3 | 1.5 |
| Rectal pad | 23 ± 1.5 | 0.8 | 24 ± 1.6 | 1.6 | 0.94 | n.s. | ||
| Salivary gland | 27 ± 0.3 | 1.0 | 22 ± 0.4 | 1.4 | 1.23 | p < 0.01 | 26 ± 2.8 | 2.2 |
| Fat body | 15 ± 1.2 | 0.5 | 15 ± 0.3 | 1.0 | 0.98 | n.s. | 16 ± 0.4 | 1.4 |
| Heart | 27 ± 3.2 | 1.0 | 31 ± 4.6 | 2.1 | 0.86 | n.s. | ||
| Trachea | 22 ± 2.1 | 1.8 | ||||||
| Ovary | 13 ± 0.2 | 0.8 | ||||||
| 21 ± 2.1 | 1.4 | |||||||
| Mated Spermatheca | 19 ± 0.7 | 1.3 | ||||||
| Testis | 81 ± 1.7 | 3.0 | ||||||
| Accessory glands | 25 ± 5.0 | 0.9 | ||||||
| Carcass | 20 ± 2.5 | 0.7 | 22 ± 3.7 | 1.4 | 0.92 | n.s. | 27 ± 9.6 | 2.3 |
| Garland cells | 20 ± 1.7 | 1.7 | ||||||
| Whole body | 27 ± 3.6 | 15 ± 0.9 | 1.79 | p < 0.05 | 12 ± 1.1 | |||
Rotate to see Transcript Table
| Transcript | Male | Female | Larval | ||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Name | ID | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Rp | Sg | Fb | Ht | Ts | Ag | Cs | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Rp | Sg | Fb | Ht | Ov | Vs | Ms | Cs | Ns | Mg | Hg | Tu | Sg | Fb | Tr | Cs | Ga |
| RA | FBtr0077095 | ||||||||||||||||||||||||||||||||||||||||
| RB | FBtr0077096 | ||||||||||||||||||||||||||||||||||||||||
| RD | FBtr0306259 | ||||||||||||||||||||||||||||||||||||||||
*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.