FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)
Gene:
Symbol
EMC2A
EMC2A
Name
ER membrane protein complex subunit 2A
ER membrane protein complex subunit 2A
Annotation Symbol
CG17556
CG17556
| Adult Male | Adult Female | Male v. Female | Larval | |||||
|---|---|---|---|---|---|---|---|---|
| Tissue | FPKM | Enrichment | FPKM | Enrichment | M/F | p value | FPKM | Enrichment |
| Head | 7.6 ± 1.7 | 1.1 | 8.0 ± 0.8 | 1.1 | 0.94 | n.s. | ||
| Eye | 11 ± 1.3 | 1.6 | 10 ± 0.4 | 1.4 | 1.03 | n.s. | ||
| Brain / CNS | 11 ± 1.0 | 1.6 | 9.4 ± 0.7 | 1.3 | 1.13 | n.s. | 9.1 ± 2.2 | 1.2 |
| Thoracicoabdominal ganglion | 12 ± 0.2 | 1.7 | 11 ± 0.4 | 1.4 | 1.09 | n.s. | ||
| Crop | 10 ± 1.2 | 1.5 | 13 ± 0.5 | 1.7 | 0.80 | n.s. | ||
| Midgut | 11 ± 1.4 | 1.6 | 11 ± 0.7 | 1.4 | 0.99 | n.s. | 8.5 ± 0.0 | 1.1 |
| Hindgut | 8.7 ± 0.6 | 1.3 | 9.6 ± 0.6 | 1.3 | 0.91 | n.s. | 8.9 ± 3.5 | 1.1 |
| Malpighian Tubules | 11 ± 2.2 | 1.6 | 11 ± 3.1 | 1.5 | 0.99 | n.s. | 13 ± 2.2 | 1.7 |
| Rectal pad | 12 ± 1.0 | 1.8 | 10 ± 0.7 | 1.4 | 1.22 | n.s. | ||
| Salivary gland | 8.1 ± 0.4 | 1.2 | 6.8 ± 1.2 | 0.9 | 1.20 | n.s. | 20 ± 3.8 | 2.6 |
| Fat body | 12 ± 4.0 | 1.9 | 8.6 ± 3.1 | 1.2 | 1.44 | n.s. | 25 ± 0.7 | 3.2 |
| Heart | 24 ± 4.3 | 3.6 | 11 ± 6.1 | 1.5 | 2.2 | p < 0.05 | ||
| Trachea | 8.8 ± 0.9 | 1.1 | ||||||
| Ovary | 8.3 ± 1.6 | 1.1 | ||||||
| Virgin Spermatheca | 3.4 ± 1.0 | 0.5 | ||||||
| Mated Spermatheca | 3.3 ± 0.6 | 0.4 | ||||||
| Testis | 16 ± 2.6 | 2.4 | ||||||
| Accessory glands | 15 ± 4.6 | 2.2 | ||||||
| Carcass | 19 ± 1.7 | 2.9 | 13 ± 1.8 | 1.7 | 1.49 | p < 0.05 | 9.6 ± 0.8 | 1.2 |
| Garland cells | 2.2 ± 0.4 | 0.3 | ||||||
| Whole body | 6.7 ± 1.4 | 7.5 ± 2.1 | 0.90 | n.s. | 7.8 ± 1.4 | |||
Rotate to see Transcript Table
| Transcript | Male | Female | Larval | ||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Name | ID | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Rp | Sg | Fb | Ht | Ts | Ag | Cs | Hd | Ey | Br | Tg | Cr | Mg | Hg | Tu | Rp | Sg | Fb | Ht | Ov | Vs | Ms | Cs | Ns | Mg | Hg | Tu | Sg | Fb | Tr | Cs | Ga |
| RA | FBtr0083375 | ||||||||||||||||||||||||||||||||||||||||
| RB | FBtr0337063 | ||||||||||||||||||||||||||||||||||||||||
*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.
These data are for a gene with identical or very similar paralogues.
In such situations the software used for analysis generally reports negative results, irrespective of the true situation. You are strongly advised to check negative results in the UCSC Genome Browser (link above).
In such situations the software used for analysis generally reports negative results, irrespective of the true situation. You are strongly advised to check negative results in the UCSC Genome Browser (link above).