FlyAtlas 2: The RNAseq-based atlas of Drosophila gene expression

Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
snoRNA:229

Annotation Symbol
CR33684

FlyBase ID
FBgn0065073

Paralogues
No paralogues

SDs Whole Body Male v. Female

Gene FPKMs and Enrichments

	Adult Male		Adult Female		Male v. Female		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment	M/F	p value	FPKM	Enrichment
Head	3295 ± 652	2.5	4880 ± 5342	0.9	0.68	n.s.
Eye	200 ± 12	0.2	255 ± 138	0.0	0.78	n.s.
Brain / CNS	545 ± 238	0.4	688 ± 335	0.1	0.79	n.s.	1172 ± 278	1.0
Thoracicoabdominal ganglion	172 ± 92	0.1	98 ± 17	0.0	1.76	n.s.
Crop	219 ± 23	0.2	243 ± 11	0.0	0.90	n.s.
Midgut	951 ± 288	0.7	1194 ± 251	0.2	0.80	n.s.	738 ± 115	0.6
Hindgut	891 ± 371	0.7	847 ± 94	0.2	1.05	n.s.	438 ± 169	0.4
Malpighian Tubules	710 ± 490	0.5	1543 ± 1730	0.3	0.46	n.s.	272 ± 81	0.2
Rectal pad	379 ± 34	0.3	443 ± 91	0.1	0.85	n.s.
Salivary gland	152 ± 6.7	0.1	81 ± 44	0.0	1.87	n.s.	790 ± 194	0.7
Fat body	1796 ± 201	1.4	2850 ± 1041	0.5	0.63	n.s.	1202 ± 175	1.0
Heart	331 ± 205	0.3	305 ± 77	0.1	1.08	n.s.
Trachea							1990 ± 787	1.7
Ovary			8162 ± 4222	1.4
Virgin Spermatheca			1818 ± 525	0.3
Mated Spermatheca			2216 ± 394	0.4
Testis	1523 ± 966	1.2
Accessory glands	1099 ± 395	0.8
Carcass	785 ± 370	0.6	970 ± 296	0.2	0.81	n.s.	1349 ± 293	1.2
Garland cells							1447 ± 450	1.2

Whole body	1322 ± 654		5645 ± 4138		0.23	n.s.	1158 ± 207

Rotate to see Transcript Table

View in UCSC Genome Browser

Transcript FPKMs

Transcript		Male															Female																Larval
Name	ID	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ts	Ag	Cs	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ov	Vs	Ms	Cs	Ns	Mg	Hg	Tu	Sg	Fb	Tr	Cs	Ga
RA	FBtr0091664

These data are for a snoRNA (small nucleolar RNA) that does not encode a protein.
There are two main classes of snoRNAs: 1. CD class snoRNAs, involved in rRNA methylation, which are generally not detected by our techniques as they are too small, and 2. ACC class snoRNAs, involved in pseudouridylation, which are generally large enough to be detected. (N.B. Data for Fat Body and Spermatheca may not be comparable with those from other tissues.)