FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
slo
Name
slowpoke
Annotation Symbol
CG10693
FlyBase ID
FBgn0003429
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head47 ± 5.52.938 ± 5.49.51.26n.s.  
Eye35 ± 6.52.125 ± 1.36.31.42n.s.  
Brain / CNS46 ± 2.92.844 ± 11111.06n.s.5.0 ± 2.02.5
Thoracicoabdominal ganglion36 ± 4.52.139 ± 3.010.00.91n.s.  
Crop3.9 ± 2.10.23.8 ± 0.01.01.03n.s.  
Midgut4.9 ± 0.60.34.9 ± 1.61.21.00n.s.12 ± 4.96.0
Hindgut0.1 ± 0.00.00.3 ± 0.10.11.00n.s.0.3 ± 0.1N.A.
Malpighian Tubules0.1 ± 0.00.00.1 ± 0.00.01.00n.s.0.0 ± 0.0N.A.
Rectal pad1.1 ± 0.10.11.8 ± 0.40.51.00n.s.  
Salivary gland4.4 ± 0.70.31.2 ± 0.10.32.2n.s.0.1 ± 0.0N.A.
Fat body2.1 ± 0.70.11.9 ± 0.30.51.07n.s.0.2 ± 0.1N.A.
Heart2.9 ± 0.30.21.8 ± 0.70.41.45n.s.  
Trachea      0.2 ± 0.1N.A.
Ovary  0.1 ± 0.00.0    
Virgin Spermatheca  3.9 ± 1.71.0    
Mated Spermatheca  3.1 ± 0.90.8    
Testis0.7 ± 0.10.0      
Accessory glands0.2 ± 0.10.0      
Carcass10 ± 1.80.66.1 ± 1.81.51.71p < 0.052.2 ± 0.31.1
Garland cells      1.0 ± 0.3N.A.
Whole body17 ± 0.83.9 ± 0.34.2p < 0.011.9 ± 0.6
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0084684
RBFBtr0084683
RCFBtr0084685
RDFBtr0100622
REFBtr0100623
RFFBtr0100624
RHFBtr0100627
RIFBtr0100629
RJFBtr0100631
RKFBtr0100632
RLFBtr0100633
RMFBtr0100634
RNFBtr0100635
ROFBtr0100636
RPFBtr0100637
RQFBtr0100638
RRFBtr0301581
RSFBtr0301582
RTFBtr0330286
RVFBtr0334294
RWFBtr0334295
RXFBtr0334296
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*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.
WARNING: Transcript Ambiguity for this Gene!
Because FlyBase assigns a unique transcript name and identifier for each unique protein, the rare cases in which such proteins result from alternative translation of the same mRNA give rise to situations in which there are two or more different identifiers for the same physical transcript. RNAseq analysis can only deal with unique sequences, and in such cases arbitrarily assigns the data from a sequence to one of the different transcript identifiers. The result is that some named transcripts will be missing, or data for some transcripts will actually include that for others. In the case of gene FBgn0003429 the situation is:

No data for FBtr0330287 — included in FBtr0084684: Alternative Stop codons (readthrough)

*** More extensive information about transcript ambiguity and its implications can be found in the Docs ***