FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Rab39
Annotation Symbol
CG12156
FlyBase ID
FBgn0029959
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head18 ± 0.11.418 ± 1.01.80.97n.s.  
Eye21 ± 0.01.621 ± 0.32.00.99n.s.  
Brain / CNS13 ± 1.11.016 ± 0.31.50.86n.s.11 ± 1.60.7
Thoracicoabdominal ganglion13 ± 4.41.017 ± 1.21.60.80n.s.  
Crop21 ± 2.41.620 ± 1.11.91.09n.s.  
Midgut19 ± 1.11.419 ± 1.11.90.97n.s.36 ± 3.52.4
Hindgut19 ± 1.51.523 ± 0.42.20.83p < 0.0519 ± 3.91.3
Malpighian Tubules35 ± 7.92.734 ± 4.53.41.02n.s.28 ± 4.81.8
Rectal pad23 ± 0.91.820 ± 0.11.91.17p < 0.05  
Salivary gland18 ± 0.81.412 ± 0.21.21.48n.s.7.3 ± 0.80.5
Fat body21 ± 1.91.625 ± 4.22.40.85n.s.13 ± 1.00.9
Heart38 ± 0.52.924 ± 122.31.60n.s.  
Trachea      8.2 ± 0.50.5
Ovary  9.4 ± 1.40.9    
Virgin Spermatheca  15 ± 1.81.5    
Mated Spermatheca  17 ± 4.11.7    
Testis7.5 ± 0.60.6      
Accessory glands11 ± 1.50.8      
Carcass27 ± 4.42.124 ± 3.82.41.10n.s.12 ± 3.40.8
Garland cells      15 ± 1.41.0
Whole body13 ± 1.110 ± 1.11.28p < 0.0515 ± 0.4
download
Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0071072
RBFBtr0307272
download
*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.