FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
Rab39
Name
Rab39
Annotation Symbol
CG12156
FlyBase ID
FBgn0029959
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head16 ± 0.71.317 ± 1.41.80.98n.s.  
Eye19 ± 0.11.519 ± 0.32.10.97n.s.  
Brain / CNS12 ± 0.91.014 ± 0.51.50.85p < 0.059.9 ± 1.50.7
Thoracicoabdominal ganglion12 ± 3.71.015 ± 1.21.60.80n.s.  
Crop19 ± 2.31.618 ± 0.71.91.08n.s.  
Midgut16 ± 0.51.316 ± 1.91.81.01n.s.32 ± 3.12.4
Hindgut17 ± 1.41.417 ± 0.31.90.95n.s.16 ± 3.11.2
Malpighian Tubules30 ± 5.12.430 ± 3.63.30.98n.s.24 ± 3.21.8
Fat body20 ± 2.11.618 ± 2.71.91.11n.s.12 ± 1.00.9
Salivary gland16 ± 0.81.311 ± 0.31.21.49n.s.6.5 ± 0.60.5
Heart34 ± 1.12.822 ± 122.41.57n.s.  
Trachea      7.1 ± 0.60.5
Ovary  8.4 ± 1.10.9    
Virgin Spermatheca  11 ± 1.31.2    
Mated Spermatheca  15 ± 4.61.7    
Testis6.6 ± 0.50.5      
Accessory glands9.3 ± 1.30.8      
Carcass23 ± 3.91.921 ± 3.02.31.09n.s.9.8 ± 1.10.7
Rectal pad22 ± 1.11.819 ± 0.72.11.18n.s.  
Garland cells      15 ± 1.81.1
Whole body12 ± 1.29.2 ± 0.91.32p < 0.0513 ± 1.0
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RAFBtr0071072
RBFBtr0307272
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.