FlyAtlas 2: The RNAseq-based atlas of Drosophila gene expression

Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
DNAlig4

Name
DNA ligase 4

Annotation Symbol
CG12176

FlyBase ID
FBgn0030506

Paralogues
Paralogues(s)

SDs Whole Body Male v. Female

Gene FPKMs and Enrichments

	Adult Male		Adult Female		Male v. Female		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment	M/F	p value	FPKM	Enrichment
Head	2.4 ± 0.3	1.0	2.5 ± 0.6	0.8	0.97	n.s.
Eye	3.5 ± 0.3	1.5	3.3 ± 0.1	1.0	1.07	n.s.
Brain / CNS	3.6 ± 0.2	1.5	3.1 ± 0.2	1.0	1.17	p < 0.05	2.4 ± 0.2	1.2
Thoracicoabdominal ganglion	3.6 ± 0.3	1.5	3.0 ± 0.2	0.9	1.19	n.s.
Crop	2.5 ± 0.3	1.0	2.3 ± 0.2	0.7	1.08	n.s.
Midgut	4.3 ± 0.1	1.8	3.8 ± 0.2	1.2	1.14	p < 0.05	2.3 ± 0.3	1.2
Hindgut	2.6 ± 0.4	1.1	2.6 ± 0.1	0.8	0.98	n.s.	1.8 ± 0.4	N.A.
Malpighian Tubules	3.9 ± 1.1	1.6	2.7 ± 0.4	0.8	1.45	n.s.	2.7 ± 0.4	1.4
Rectal pad	2.4 ± 0.2	1.0	2.2 ± 0.2	0.7	1.09	n.s.
Salivary gland	2.9 ± 0.4	1.2	2.9 ± 0.4	0.9	0.99	n.s.	1.8 ± 0.1	N.A.
Fat body	1.5 ± 0.6	0.6	1.4 ± 0.7	0.4	1.00	n.s.	3.4 ± 1.1	1.7
Heart	2.5 ± 0.4	1.0	2.6 ± 1.4	0.8	0.95	n.s.
Trachea							2.2 ± 0.1	1.1
Ovary			3.5 ± 0.5	1.1
Virgin Spermatheca			1.3 ± 0.2	0.4
Mated Spermatheca			1.4 ± 0.6	0.4
Testis	7.5 ± 0.4	3.1
Accessory glands	2.2 ± 0.2	0.9
Carcass	2.7 ± 0.1	1.1	2.9 ± 0.1	0.9	0.92	n.s.	1.7 ± 0.4	N.A.
Garland cells							2.3 ± 0.7	1.1

Whole body	2.4 ± 0.4		3.2 ± 0.4		0.75	n.s.	1.9 ± 0.1

Rotate to see Transcript Table

View in UCSC Genome Browser

Transcript FPKMs

Transcript		Male															Female																Larval
Name	ID	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ts	Ag	Cs	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ov	Vs	Ms	Cs	Ns	Mg	Hg	Tu	Sg	Fb	Tr	Cs	Ga
RA	FBtr0073847

*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.