FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
Sh
Name
Shaker
Annotation Symbol
CG12348
FlyBase ID
FBgn0003380
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head57 ± 5.54.238 ± 15131.52n.s.  
Eye35 ± 112.623 ± 0.87.61.54n.s.  
Brain / CNS38 ± 0.62.837 ± 10121.03n.s.5.2 ± 0.62.6
Thoracicoabdominal ganglion41 ± 7.23.044 ± 3.8150.91n.s.  
Crop1.8 ± 1.20.11.3 ± 0.50.41.00n.s.  
Midgut0.8 ± 0.10.10.5 ± 0.10.21.00n.s.0.5 ± 0.2N.A.
Hindgut1.3 ± 0.20.10.6 ± 0.20.21.00p < 0.051.7 ± 0.1N.A.
Malpighian Tubules0.2 ± 0.10.00.1 ± 0.10.01.00n.s.0.0 ± 0.0N.A.
Fat body0.7 ± 0.40.10.8 ± 0.70.31.00n.s.0.1 ± 0.1N.A.
Salivary gland3.1 ± 0.70.21.2 ± 0.20.41.53n.s.0.6 ± 0.2N.A.
Heart1.2 ± 0.40.11.4 ± 0.90.51.00n.s.  
Trachea      0.2 ± 0.1N.A.
Ovary  0.0 ± 0.00.0    
Virgin Spermatheca  2.3 ± 0.90.8    
Mated Spermatheca  3.2 ± 0.91.1    
Testis1.2 ± 0.50.1      
Accessory glands0.1 ± 0.10.0      
Carcass6.3 ± 0.80.55.9 ± 0.92.01.07n.s.2.4 ± 0.21.2
Rectal pad1.8 ± 0.40.12.3 ± 0.40.80.87n.s.  
Garland cells      3.6 ± 0.61.8
Whole body14 ± 1.43.0 ± 0.44.6p < 0.010.8 ± 0.1
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RAFBtr0089659
RBFBtr0089658
RCFBtr0089661
RDFBtr0089660
REFBtr0089657
RFFBtr0089663
RHFBtr0301955
RIFBtr0302902
RJFBtr0302903
RKFBtr0308199
RLFBtr0308200
RMFBtr0332299
RQFBtr0346703
RSFBtr0346705
RTFBtr0346706
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.