FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
NAT1
Annotation Symbol
CG3845
FlyBase ID
FBgn0010488
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head40 ± 3.81.241 ± 2.40.70.97n.s.  
Eye48 ± 3.51.443 ± 0.60.71.13n.s.  
Brain / CNS40 ± 2.41.238 ± 4.80.61.07n.s.42 ± 4.10.9
Thoracicoabdominal ganglion31 ± 2.70.934 ± 1.80.60.91n.s.  
Crop35 ± 4.31.028 ± 7.60.51.28n.s.  
Midgut41 ± 1.81.232 ± 1.50.51.26p < 0.01120 ± 162.6
Hindgut30 ± 1.90.933 ± 3.50.60.89n.s.35 ± 4.70.8
Malpighian Tubules42 ± 2.31.246 ± 2.30.80.91n.s.68 ± 161.5
Rectal pad26 ± 2.00.822 ± 2.30.41.17n.s.  
Salivary gland36 ± 0.11.138 ± 6.70.60.96n.s.40 ± 2.50.9
Fat body36 ± 3.41.039 ± 4.90.70.91n.s.55 ± 6.31.2
Heart40 ± 7.61.250 ± 8.10.90.78n.s.  
Trachea      41 ± 5.90.9
Ovary  71 ± 3.51.2    
Virgin Spermatheca  39 ± 1.30.7    
Mated Spermatheca  40 ± 1.60.7    
Testis69 ± 7.62.0      
Accessory glands31 ± 1.60.9      
Carcass30 ± 1.40.936 ± 4.60.60.85n.s.30 ± 9.50.7
Garland cells      67 ± 6.51.5
Whole body34 ± 3.659 ± 4.40.58p < 0.0146 ± 4.8
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0087786
RBFBtr0087787
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*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.
WARNING: Transcript Ambiguity for this Gene!
Because FlyBase assigns a unique transcript name and identifier for each unique protein, the rare cases in which such proteins result from alternative translation of the same mRNA give rise to situations in which there are two or more different identifiers for the same physical transcript. RNAseq analysis can only deal with unique sequences, and in such cases arbitrarily assigns the data from a sequence to one of the different transcript identifiers. The result is that some named transcripts will be missing, or data for some transcripts will actually include that for others. In the case of gene FBgn0010488 the situation is:

No data for FBtr0334772 — included in FBtr0087786: Alternative Start codons in same reading frame

*** More extensive information about transcript ambiguity and its implications can be found in the Docs ***