FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)

Gene:

Symbol
 Hnf4
Name
 Hepatocyte nuclear factor 4
Annotation Symbol
 CG9310
FlyBase ID
FBgn0004914
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SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head13 ± 0.20.716 ± 2.01.40.80n.s.  
Eye14 ± 1.50.814 ± 0.11.20.98n.s.  
Brain / CNS2.6 ± 0.00.13.1 ± 0.20.30.82n.s.2.2 ± 0.10.3
Thoracicoabdominal ganglion5.6 ± 0.10.35.7 ± 0.80.50.99n.s.  
Crop48 ± 1.32.741 ± 123.51.18n.s.  
Midgut19 ± 0.91.113 ± 1.11.11.44p < 0.0118 ± 1.72.3
Hindgut18 ± 0.91.022 ± 0.51.80.84p < 0.014.0 ± 1.10.5
Malpighian Tubules20 ± 3.21.121 ± 2.01.70.97n.s.16 ± 0.92.0
Fat body43 ± 2.12.440 ± 1.53.41.08n.s.27 ± 1.93.4
Salivary gland12 ± 0.80.78.5 ± 0.80.71.42n.s.9.9 ± 1.61.3
Heart49 ± 142.744 ± 163.71.14n.s.  
Trachea      6.0 ± 0.50.8
Ovary  9.0 ± 0.40.8    
Virgin Spermatheca  10.0 ± 1.20.8    
Mated Spermatheca  16 ± 4.11.3    
Testis4.0 ± 0.40.2      
Accessory glands7.8 ± 0.40.4      
Carcass34 ± 5.41.931 ± 2.82.61.09n.s.5.4 ± 0.20.7
Rectal pad41 ± 3.42.230 ± 2.92.61.34n.s.  
Garland cells      9.3 ± 1.11.2
Whole body18 ± 0.212 ± 0.21.52p < 0.017.8 ± 0.7
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Rotate to see Transcript Table
View in UCSC Genome Browser
Transcript FPKMs 
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuFbSgHtTsAgCsRpHdEyBrTgCrMgHgTuFbSgHtOvVsMsCsRpNsMgHgTuFbSgTrCsGa
RAFBtr0079747
RBFBtr0079748
RDFBtr0112846
REFBtr0336633
RFFBtr0344784
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*Tissue Comparability:
See Docs for info on the chemistry used to sequence different tissues.