FlyAtlas 2: The RNAseq-based atlas of Drosophila gene expression

Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Act42A

Name
Actin 42A

Annotation Symbol
CG12051

FlyBase ID
FBgn0000043

Paralogues
Paralogues(s)

SDs Whole Body Male v. Female

Gene FPKMs and Enrichments

	Adult Male		Adult Female		Male v. Female		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment	M/F	p value	FPKM	Enrichment
Head	14 ± 1.6	0.3	18 ± 3.5	0.3	0.74	n.s.
Eye	6.6 ± 1.2	0.1	9.7 ± 0.9	0.1	0.68	n.s.
Brain / CNS	13 ± 0.9	0.3	14 ± 1.0	0.2	0.92	n.s.	289 ± 26	1.3
Thoracicoabdominal ganglion	22 ± 2.3	0.5	28 ± 3.0	0.4	0.80	n.s.
Crop	7.4 ± 2.4	0.2	13 ± 3.7	0.2	0.59	n.s.
Midgut	54 ± 33	1.2	223 ± 28	3.4	0.24	p < 0.01	359 ± 44	1.6
Hindgut	12 ± 4.3	0.3	17 ± 2.3	0.3	0.73	n.s.	69 ± 33	0.3
Malpighian Tubules	9.2 ± 3.1	0.2	7.2 ± 3.7	0.1	1.29	n.s.	54 ± 7.6	0.2
Rectal pad	3.8 ± 0.3	0.1	11 ± 1.9	0.2	0.36	n.s.
Salivary gland	11 ± 0.6	0.2	22 ± 14	0.3	0.48	n.s.	238 ± 32	1.1
Fat body	5.6 ± 1.0	0.1	10 ± 6.6	0.2	0.53	n.s.	79 ± 31	0.4
Heart	21 ± 1.0	0.5	52 ± 9.7	0.8	0.41	p < 0.05
Trachea							156 ± 21	0.7
Ovary			74 ± 6.9	1.1
Virgin Spermatheca			15 ± 0.9	0.2
Mated Spermatheca			15 ± 2.6	0.2
Testis	334 ± 24	7.3
Accessory glands	31 ± 8.8	0.7
Carcass	16 ± 2.9	0.3	28 ± 5.4	0.4	0.57	p < 0.05	163 ± 37	0.7
Garland cells							147 ± 33	0.7

Whole body	46 ± 5.9		66 ± 8.8		0.70	p < 0.05	223 ± 33

Rotate to see Transcript Table

View in UCSC Genome Browser

Transcript FPKMs

Transcript		Male															Female																Larval
Name	ID	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ts	Ag	Cs	Hd	Ey	Br	Tg	Cr	Mg	Hg	Tu	Rp	Sg	Fb	Ht	Ov	Vs	Ms	Cs	Ns	Mg	Hg	Tu	Sg	Fb	Tr	Cs	Ga
RA	FBtr0086029

*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.