FlyAtlas 2 – Gene
For a particular Drosophila gene, find the pattern of expression in different tissues.
 
Gene Symbol (e.g. vkg) — start typing, then select from the autosuggest menu
Gene Name (e.g. viking)
Annotation Symbol (e.g. CG16858)
Gene ID (e.g. FBgn0016075)
Transcript ID (e.g. FBtr0079036)

Gene:

Symbol
Hex-A
Name
Hexokinase A
Annotation Symbol
CG3001
FlyBase ID
FBgn0001186
Paralogues
Paralogues(s)
link out
SDs   Whole Body   Male v. Female
Gene FPKMs and Enrichments 
Adult MaleAdult FemaleMale v. FemaleLarval
TissueFPKMEnrichmentFPKMEnrichmentM/Fp valueFPKMEnrichment
Head43 ± 2.01.043 ± 7.41.60.99n.s.  
Eye49 ± 2.41.153 ± 3.52.00.92n.s.  
Brain / CNS32 ± 2.40.734 ± 1.41.30.97n.s.19 ± 4.61.2
Thoracicoabdominal ganglion51 ± 1.11.248 ± 7.81.81.06n.s.  
Crop32 ± 2.90.728 ± 7.01.01.14n.s.  
Midgut68 ± 101.648 ± 101.81.41n.s.32 ± 1.82.0
Hindgut47 ± 5.21.143 ± 4.91.61.09n.s.4.5 ± 0.80.3
Malpighian Tubules63 ± 8.71.450 ± 6.51.91.27n.s.16 ± 4.51.0
Rectal pad41 ± 2.50.929 ± 0.71.11.39p < 0.01  
Salivary gland85 ± 1.11.968 ± 112.61.25n.s.25 ± 2.01.6
Fat body45 ± 6.41.030 ± 7.01.11.49n.s.23 ± 2.41.4
Heart40 ± 160.930 ± 111.11.37n.s.  
Trachea      9.2 ± 1.40.6
Ovary  22 ± 0.60.8    
Virgin Spermatheca  384 ± 3615    
Mated Spermatheca  319 ± 2012    
Testis37 ± 5.10.8      
Accessory glands29 ± 4.90.7      
Carcass72 ± 5.31.655 ± 5.22.11.30p < 0.0518 ± 4.21.1
Garland cells      11 ± 4.30.7
Whole body44 ± 2.426 ± 3.01.65p < 0.0116 ± 4.6
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Rotate to see Transcript Table
TranscriptMaleFemaleLarval
NameIDHdEyBrTgCrMgHgTuRpSgFbHtTsAgCsHdEyBrTgCrMgHgTuRpSgFbHtOvVsMsCsNsMgHgTuSgFbTrCsGa
RAFBtr0071361
RCFBtr0333335
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*Tissue Comparability: See Docs for info on the chemistry used to sequence different tissues.
WARNING: Transcript Ambiguity for this Gene!
Because FlyBase assigns a unique transcript name and identifier for each unique protein, the rare cases in which such proteins result from alternative translation of the same mRNA give rise to situations in which there are two or more different identifiers for the same physical transcript. RNAseq analysis can only deal with unique sequences, and in such cases arbitrarily assigns the data from a sequence to one of the different transcript identifiers. The result is that some named transcripts will be missing, or data for some transcripts will actually include that for others. In the case of gene FBgn0001186 the situation is:

No data for FBtr0071362 — included in FBtr0071361: Alternative Start codons in same reading frame

*** More extensive information about transcript ambiguity and its implications can be found in the Docs ***